ENSGALG00000042604


Gallus gallus

Features
Gene ID: ENSGALG00000042604
  
Biological name :ARX
  
Synonyms : aristaless related homeobox / ARX
  
Possible biological names infered from orthology : Homeobox protein ARX / O35085 / Q96QS3
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 117839213
Gene end: 117843292
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000048796
NCBI entrez gene - 107057587     See in Manteia.
RefSeq - XM_015302663
swissprot - A0A1D5P7V3
Ensembl - ENSGALG00000042604
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arxaENSDARG00000058011Danio rerio
 arxbENSDARG00000101523Danio rerio
 ARXENSG00000004848Homo sapiens
 ArxENSMUSG00000035277Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ALX4 / ALX homeobox 4 / O35137* / Q9H161* / Homeobox protein aristaless-like 4 *ENSGALG0000003258423
ENSGALG0000004658422
ALX1 / ALX homeobox 1 / Q15699* / Q8C8B0* / ALX homeobox protein 1 *ENSGALG0000002721319
VSX2 / visual system homeobox 2 / P58304* / Q61412*ENSGALG0000003351717
PHOX2B / paired like homeobox 2b / O35690* / Q99453* / Paired mesoderm homeobox protein 2B *ENSGALG0000001425016
DRGX / dorsal root ganglia homeobox / A6NNA5* / Prrxl1* / Q8BYH0* / paired related homeobox protein-like 1*ENSGALG0000003082216
RAX2 / Q9PVY0 / Retinal homeobox protein Rx1 / Q96IS3* / retina and anterior neural fold homeobox 2*ENSGALG0000001343115
VSX1 / visual system homeobox 1 / Q91V10* / Q9NZR4*ENSGALG0000003757614
RAX / retina and anterior neural fold homeobox / O35602* / Q9Y2V3* / Retinal homeobox protein Rx *ENSGALG0000003327913
UNCX / UNC homeobox / A6NJT0* / O08934*ENSGALG0000003929213
ALX3 / ALX homeobox 3 / O70137* / O95076* / Homeobox protein aristaless-like 3 *ENSGALG0000002586712
ISX / intestine specific homeobox / A1A546* / Q2M1V0*ENSGALG0000001255711


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003654  OAR domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0021759 globus pallidus development IEA
 biological_processGO:0021772 olfactory bulb development IEA
 biological_processGO:0021800 cerebral cortex tangential migration IEA
 biological_processGO:0021831 embryonic olfactory bulb interneuron precursor migration IEA
 biological_processGO:0021846 cell proliferation in forebrain IEA
 biological_processGO:0021853 cerebral cortex GABAergic interneuron migration IEA
 biological_processGO:0030900 forebrain development IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 biological_processGO:0044241 lipid digestion IEA
 biological_processGO:0046622 positive regulation of organ growth IEA
 biological_processGO:0072148 epithelial cell fate commitment IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IEA
 molecular_functionGO:0001206 transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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