ENSGALG00000043701


Gallus gallus

Features
Gene ID: ENSGALG00000043701
  
Biological name :ELK3
  
Synonyms : ELK3 / ELK3, ETS transcription factor
  
Possible biological names infered from orthology : ETS domain-containing protein Elk-3 / P41970 / P41971
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 45759156
Gene end: 45793336
  
Corresponding Affymetrix probe sets: Gga.4498.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056017
NCBI entrez gene - 417919     See in Manteia.
RefSeq - NM_001030749
RefSeq Peptide - NP_001025920
swissprot - Q5ZMM7
Ensembl - ENSGALG00000043701
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 elk3ENSDARG00000018688Danio rerio
 ELK3ENSG00000111145Homo sapiens
 Elk3ENSMUSG00000008398Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ELK4* / P28324* / P41158* / ELK4, ETS transcription factor* / ETS domain-containing protein Elk-4 *ENSGALG0000004213751
ETV3* / ETV3L* / P41162* / Q6ZN32* / Q8R4Z4* / ETS variant 3* / ETS variant 3 like* / ETS translocation variant 3 *ENSGALG0000000066920
ERG / Q90837 / Transcriptional regulator Erg / P11308* / P81270* / ERG, ETS transcription factor*ENSGALG0000001605816
FLI1 / Friend leukemia integration 1 transcription factor / P26323* / Q01543* / Fli-1 proto-oncogene, ETS transcription factor*ENSGALG0000000116116
ETV3* / ETV3L* / P41162* / Q6ZN32* / Q8R4Z4* / ETS variant 3* / ETS variant 3 like* / ETS translocation variant 3 *ENSGALG0000002713815
ENSGALG0000002669815
ETV4 / ETS variant 4 / P28322* / P43268* / ETS translocation variant 4 *ENSGALG0000003667815
ETV5 / ETS translocation variant 5 / P41161* / Q9CXC9* / ETS variant 5*ENSGALG0000000576814
ETS1 / protein C-ets-1 / P14921* / P27577* / ETS proto-oncogene 1, transcription factor*ENSGALG0000000114314
ETS2 / P10157 / Protein C-ets-2 ENSGALG0000001605914
GABPA / GA binding protein transcription factor alpha subunit / Q00422* / Q06546* / GA-binding protein alpha chain *ENSGALG0000001576314
ETV1 / ETS variant 1 / P41164* / P50549* / ETS translocation variant 1 *ENSGALG0000003550414


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0042060 wound healing IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0032422 purine-rich negative regulatory element binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr