ENSDARG00000018688


Danio rerio

Features
Gene ID: ENSDARG00000018688
  
Biological name :elk3
  
Synonyms : elk3 / ELK3, ETS-domain protein
  
Possible biological names infered from orthology : ELK3, ETS transcription factor / ETS domain-containing protein Elk-3 / P41970 / P41971
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 7677318
Gene end: 7713665
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000015956
Ensembl peptide - ENSDARP00000123783
NCBI entrez gene - 557074     See in Manteia.
swissprot - F1QIB0
ZFIN ID - ZDB-GENE-030716-2
Ensembl - ENSDARG00000018688
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ELK3ENSGALG00000043701Gallus gallus
 ELK3ENSG00000111145Homo sapiens
 Elk3ENSMUSG00000008398Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
elk4 / ELK4, ETS-domain protein / P28324* / P41158* / ELK4, ETS transcription factor* / ETS domain-containing protein Elk-4 *ENSDARG0000007709247
elk1 / ELK1, member of ETS oncogene family / P19419* / P41969* / ELK1, ETS transcription factor* / ETS domain-containing protein Elk-1 *ENSDARG0000007806638
erfl3 / Ets2 repressor factor like 3ENSDARG0000006280119
erf / Ets2 repressor factorENSDARG0000006341719
fev / A3FEM2 / FEV (ETS oncogene family)ENSDARG0000000924216
fli1a / Fli-1 proto-oncogene, ETS transcription factor a / FLI1* / P26323* / Q01543* / Fli-1 proto-oncogene, ETS transcription factor* / Friend leukemia integration 1 transcription factor *ENSDARG0000005463216
fli1b / Fli-1 proto-oncogene, ETS transcription factor bENSDARG0000004008015
erfl1 / Ets2 repressor factor like 1 / ERF* / Gm4881* / P50548* / AC010616.1* / ETS2 repressor factor*ENSDARG0000008689215
etv4 / ets variant 4 / P28322* / P43268* / ETS translocation variant 4 *ENSDARG0000001830314
etv1 / ets variant 1ENSDARG0000010195914
gabpa / GA binding protein transcription factor, alpha subunit / Q00422* / Q06546* / GA-binding protein alpha chain *ENSDARG0000006928914
etv5a / ets variant 5a / ETV1* / P41164* / P50549* / ETS variant 1* / ETS translocation variant 1 *ENSDARG0000006976314
erg / v-ets avian erythroblastosis virus E26 oncogene homolog / FLI1* / Q01543* / Fli-1 proto-oncogene, ETS transcription factor*ENSDARG0000007730414
etv5b / ets variant 5bENSDARG0000004451113
etv2 / ets variant 2 / O00321* / P41163* / ETS translocation variant 2 *ENSDARG0000005386813
ets2 / v-ets avian erythroblastosis virus E26 oncogene homolog 2 / ETS1* / P14921* / P27577* / Protein C-ets-1 * / ETS proto-oncogene 1, transcription factor*ENSDARG0000010398013
si:ch211-265g22.4ENSDARG0000007651211
CABZ01069595.1 / ELK4* / P28324* / ELK4, ETS transcription factor*ENSDARG000000244310


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0030154 cell differentiation IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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