ENSDARG00000018303


Danio rerio

Features
Gene ID: ENSDARG00000018303
  
Biological name :etv4
  
Synonyms : ets variant 4 / etv4
  
Possible biological names infered from orthology : ETS translocation variant 4 / P28322 / P43268
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 27536095
Gene end: 27568694
  
Corresponding Affymetrix probe sets: Dr.618.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000123690
Ensembl peptide - ENSDARP00000016969
Ensembl peptide - ENSDARP00000113224
NCBI entrez gene - 30700     See in Manteia.
RefSeq - NM_131425
RefSeq - XM_009306586
RefSeq Peptide - NP_571500
swissprot - F1RD02
swissprot - F1R9U5
swissprot - F8W5E8
ZFIN ID - ZDB-GENE-990415-71
Ensembl - ENSDARG00000018303
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ETV4ENSGALG00000036678Gallus gallus
 ETV4ENSG00000175832Homo sapiens
 Etv4ENSMUSG00000017724Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
etv1 / ets variant 1ENSDARG0000010195951
etv5a / ets variant 5a / ETV1* / P41164* / P50549* / ETS variant 1* / ETS translocation variant 1 *ENSDARG0000006976349
etv5b / ets variant 5bENSDARG0000004451147
ets2 / v-ets avian erythroblastosis virus E26 oncogene homolog 2 / ETS1* / P14921* / P27577* / Protein C-ets-1 * / ETS proto-oncogene 1, transcription factor*ENSDARG0000010398017
fli1a / Fli-1 proto-oncogene, ETS transcription factor a / FLI1* / P26323* / Q01543* / Fli-1 proto-oncogene, ETS transcription factor* / Friend leukemia integration 1 transcription factor *ENSDARG0000005463217
gabpa / GA binding protein transcription factor, alpha subunit / Q00422* / Q06546* / GA-binding protein alpha chain *ENSDARG0000006928916
erg / v-ets avian erythroblastosis virus E26 oncogene homolog / FLI1* / Q01543* / Fli-1 proto-oncogene, ETS transcription factor*ENSDARG0000007730416
fli1b / Fli-1 proto-oncogene, ETS transcription factor bENSDARG0000004008015
fev / A3FEM2 / FEV (ETS oncogene family)ENSDARG0000000924214
elk4 / ELK4, ETS-domain protein / P28324* / P41158* / ELK4, ETS transcription factor* / ETS domain-containing protein Elk-4 *ENSDARG0000007709213
etv2 / ets variant 2 / O00321* / P41163* / ETS translocation variant 2 *ENSDARG0000005386813
elk1 / ELK1, member of ETS oncogene family / P19419* / P41969* / ELK1, ETS transcription factor* / ETS domain-containing protein Elk-1 *ENSDARG0000007806612
elk3 / ELK3, ETS-domain protein / P41970* / P41971* / ELK3, ETS transcription factor* / ETS domain-containing protein Elk-3 *ENSDARG0000001868812
erfl3 / Ets2 repressor factor like 3ENSDARG0000006280111
erf / Ets2 repressor factorENSDARG0000006341711
erfl1 / Ets2 repressor factor like 1 / ERF* / Gm4881* / P50548* / AC010616.1* / ETS2 repressor factor*ENSDARG0000008689211
si:ch211-265g22.4ENSDARG000000765129
CABZ01069595.1 / ELK4* / P28324* / ELK4, ETS transcription factor*ENSDARG000000244314


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR006715  PEA3-type ETS-domain transcription factor, N-terminal
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
MAPK6/MAPK4 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000151 pronephros pronephros has fewer parts of type pronephros multi-ciliated epithelial cell, abnormal
pronephros multi-ciliated epithelial cell differentiation decreased occurrence , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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