ENSDARG00000077092


Danio rerio

Features
Gene ID: ENSDARG00000077092
  
Biological name :elk4
  
Synonyms : elk4 / ELK4, ETS-domain protein
  
Possible biological names infered from orthology : ELK4, ETS transcription factor / ETS domain-containing protein Elk-4 / P28324 / P41158
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 38470545
Gene end: 38492564
  
Corresponding Affymetrix probe sets: Dr.8169.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000093624
Ensembl peptide - ENSDARP00000065612
NCBI entrez gene - 30093     See in Manteia.
RefSeq - NM_001308956
RefSeq Peptide - NP_001295885
swissprot - F1R0K1
swissprot - F1QFL0
ZFIN ID - ZDB-GENE-030716-1
Ensembl - ENSDARG00000077092
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000042137Gallus gallus
 ELK4ENSG00000158711Homo sapiens
 Elk4ENSMUSG00000026436Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
elk3 / ELK3, ETS-domain protein / P41970* / P41971* / ELK3, ETS transcription factor* / ETS domain-containing protein Elk-3 *ENSDARG0000001868844
elk1 / ELK1, member of ETS oncogene family / P19419* / P41969* / ELK1, ETS transcription factor* / ETS domain-containing protein Elk-1 *ENSDARG0000007806636
erfl3 / Ets2 repressor factor like 3ENSDARG0000006280120
erf / Ets2 repressor factorENSDARG0000006341719
fli1b / Fli-1 proto-oncogene, ETS transcription factor bENSDARG0000004008015
fli1a / Fli-1 proto-oncogene, ETS transcription factor a / FLI1* / P26323* / Q01543* / Fli-1 proto-oncogene, ETS transcription factor* / Friend leukemia integration 1 transcription factor *ENSDARG0000005463214
erg / v-ets avian erythroblastosis virus E26 oncogene homolog / FLI1* / Q01543* / Fli-1 proto-oncogene, ETS transcription factor*ENSDARG0000007730414
fev / A3FEM2 / FEV (ETS oncogene family)ENSDARG0000000924214
etv5a / ets variant 5a / ETV1* / P41164* / P50549* / ETS variant 1* / ETS translocation variant 1 *ENSDARG0000006976314
erfl1 / Ets2 repressor factor like 1 / ERF* / Gm4881* / P50548* / AC010616.1* / ETS2 repressor factor*ENSDARG0000008689214
etv4 / ets variant 4 / P28322* / P43268* / ETS translocation variant 4 *ENSDARG0000001830314
etv1 / ets variant 1ENSDARG0000010195913
etv5b / ets variant 5bENSDARG0000004451113
gabpa / GA binding protein transcription factor, alpha subunit / Q00422* / Q06546* / GA-binding protein alpha chain *ENSDARG0000006928913
ets2 / v-ets avian erythroblastosis virus E26 oncogene homolog 2 / ETS1* / P14921* / P27577* / Protein C-ets-1 * / ETS proto-oncogene 1, transcription factor*ENSDARG0000010398013
etv2 / ets variant 2 / O00321* / P41163* / ETS translocation variant 2 *ENSDARG0000005386812
si:ch211-265g22.4ENSDARG0000007651210
CABZ01069595.1 / ELK4* / P28324* / ELK4, ETS transcription factor*ENSDARG000000244310


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0030154 cell differentiation IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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