ENSDARG00000078066


Danio rerio

Features
Gene ID: ENSDARG00000078066
  
Biological name :elk1
  
Synonyms : elk1 / ELK1, member of ETS oncogene family
  
Possible biological names infered from orthology : ELK1, ETS transcription factor / ETS domain-containing protein Elk-1 / P19419 / P41969
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 8712446
Gene end: 8744898
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000098027
Ensembl peptide - ENSDARP00000131419
Ensembl peptide - ENSDARP00000131641
swissprot - A0A0R4IC78
swissprot - A0A0R4IDT6
swissprot - E7F086
ZFIN ID - ZDB-GENE-090529-5
Ensembl - ENSDARG00000078066
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ELK1ENSG00000126767Homo sapiens
 Elk1ENSMUSG00000009406Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
elk4 / ELK4, ETS-domain protein / P28324* / P41158* / ELK4, ETS transcription factor* / ETS domain-containing protein Elk-4 *ENSDARG0000007709231
elk3 / ELK3, ETS-domain protein / P41970* / P41971* / ELK3, ETS transcription factor* / ETS domain-containing protein Elk-3 *ENSDARG0000001868829
erf / Ets2 repressor factorENSDARG0000006341717
erfl3 / Ets2 repressor factor like 3ENSDARG0000006280116
erg / v-ets avian erythroblastosis virus E26 oncogene homolog / FLI1* / Q01543* / Fli-1 proto-oncogene, ETS transcription factor*ENSDARG0000007730413
erfl1 / Ets2 repressor factor like 1 / ERF* / Gm4881* / P50548* / AC010616.1* / ETS2 repressor factor*ENSDARG0000008689213
fli1a / Fli-1 proto-oncogene, ETS transcription factor a / FLI1* / P26323* / Q01543* / Fli-1 proto-oncogene, ETS transcription factor* / Friend leukemia integration 1 transcription factor *ENSDARG0000005463212
etv4 / ets variant 4 / P28322* / P43268* / ETS translocation variant 4 *ENSDARG0000001830312
fev / A3FEM2 / FEV (ETS oncogene family)ENSDARG0000000924212
ets2 / v-ets avian erythroblastosis virus E26 oncogene homolog 2 / ETS1* / P14921* / P27577* / Protein C-ets-1 * / ETS proto-oncogene 1, transcription factor*ENSDARG0000010398012
fli1b / Fli-1 proto-oncogene, ETS transcription factor bENSDARG0000004008011
etv5a / ets variant 5a / ETV1* / P41164* / P50549* / ETS variant 1* / ETS translocation variant 1 *ENSDARG0000006976311
etv5b / ets variant 5bENSDARG0000004451111
gabpa / GA binding protein transcription factor, alpha subunit / Q00422* / Q06546* / GA-binding protein alpha chain *ENSDARG0000006928911
etv1 / ets variant 1ENSDARG0000010195911
etv2 / ets variant 2 / O00321* / P41163* / ETS translocation variant 2 *ENSDARG0000005386810
si:ch211-265g22.4ENSDARG000000765128
CABZ01069595.1 / ELK4* / P28324* / ELK4, ETS transcription factor*ENSDARG000000244310


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0030154 cell differentiation IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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