ENSMUSG00000002578


Mus musculus

Features
Gene ID: ENSMUSG00000002578
  
Biological name :Ikzf4
  
Synonyms : Ikzf4 / Mus musculus IKAROS family zinc finger 4 (Ikzf4), transcript variant 3, mRNA. / Q8C208
  
Possible biological names infered from orthology : IKAROS family zinc finger 4 / Q9H2S9
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: D3
Gene start: 128630843
Gene end: 128645991
  
Corresponding Affymetrix probe sets: 10373502 (MoGene1.0st)   1438274_at (Mouse Genome 430 2.0 Array)   1457342_at (Mouse Genome 430 2.0 Array)   1460664_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000114404
Ensembl peptide - ENSMUSP00000152617
Ensembl peptide - ENSMUSP00000152663
Ensembl peptide - ENSMUSP00000152758
Ensembl peptide - ENSMUSP00000152234
NCBI entrez gene - 22781     See in Manteia.
MGI - MGI:1343139
RefSeq - XM_017313933
RefSeq - XM_006513615
RefSeq - XM_006513616
RefSeq - XM_011243440
RefSeq - XM_011243441
RefSeq - XM_011243442
RefSeq - XM_017313932
RefSeq - NM_001358536
RefSeq - NM_001358537
RefSeq - NM_011772
RefSeq - XM_006513612
RefSeq - XM_006513613
RefSeq - XM_006513614
RefSeq Peptide - NP_035902
RefSeq Peptide - NP_001345465
RefSeq Peptide - NP_001345466
swissprot - A0A1Y7VK30
swissprot - Q8C208
swissprot - A0A1Y7VK04
Ensembl - ENSMUSG00000002578
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IKZF4ENSDARG00000037068Danio rerio
 IKZF4ENSGALG00000035734Gallus gallus
 IKZF4ENSG00000123411Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ikzf2 / P81183 / Zinc finger protein Helios / Q9UKS7* / IKAROS family zinc finger 2*ENSMUSG0000002599749
Ikzf1 / IKAROS family zinc finger 1 / Q13422*ENSMUSG0000001865443
Ikzf3 / O08900 / Zinc finger protein Aiolos / Q9UKT9* / IKAROS family zinc finger 3*ENSMUSG0000001816838
Ikzf5 / Q8BU00 / Zinc finger protein Pegasus / Q9H5V7* / IKAROS family zinc finger 5*ENSMUSG0000004016717


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IPI
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:0051260 protein homooligomerization ISO
 biological_processGO:0051291 protein heterooligomerization ISO
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0016604 nuclear body ISO
 cellular_componentGO:0032991 protein-containing complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding ISO
 molecular_functionGO:0019904 protein domain specific binding ISO
 molecular_functionGO:0042803 protein homodimerization activity IPI
 molecular_functionGO:0043425 bHLH transcription factor binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IDA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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