ENSMUSG00000019952


Mus musculus

Features
Gene ID: ENSMUSG00000019952
  
Biological name :Poc1b
  
Synonyms : Poc1b / POC1 centriolar protein B / Q8BHD1
  
Possible biological names infered from orthology : Q8TC44
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: C3
Gene start: 99107036
Gene end: 99198074
  
Corresponding Affymetrix probe sets: 10366026 (MoGene1.0st)   1429325_at (Mouse Genome 430 2.0 Array)   1453110_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000124144
Ensembl peptide - ENSMUSP00000151221
Ensembl peptide - ENSMUSP00000125423
Ensembl peptide - ENSMUSP00000020113
Ensembl peptide - ENSMUSP00000123719
NCBI entrez gene - 382406     See in Manteia.
MGI - MGI:1918511
RefSeq - XM_011243502
RefSeq - NM_027740
RefSeq Peptide - NP_082016
swissprot - A0A1W2P6E5
swissprot - A6H699
swissprot - Q8BHD1
swissprot - Q9D3W6
swissprot - F6VAH7
Ensembl - ENSMUSG00000019952
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 poc1bENSDARG00000021110Danio rerio
 POC1BENSGALG00000035493Gallus gallus
 POC1BENSG00000139323Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Poc1a / Q8JZX3 / POC1 centriolar protein A / Q8NBT0*ENSMUSG0000002334548
Wdr5 / P61965 / WD repeat domain 5 / P61964*ENSMUSG0000002691720
Nle1 / Q8VEJ4 / Notchless protein homolog 1 / Q9NVX2* / notchless homolog 1*ENSMUSG0000002069220
Katnb1 / Q8BG40 / Katanin p80 WD40 repeat-containing subunit B1 / Q9BVA0* / katanin regulatory subunit B1*ENSMUSG0000003178719
Wdr5b / Q9D7H2 / WD repeat domain 5B / Q86VZ2*ENSMUSG0000003437919
Wdr38 / Q9D994 / WD repeat domain 38 / Q5JTN6*ENSMUSG0000003529518
P63005 / Pafah1b1 / platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 / P43034* / platelet activating factor acetylhydrolase 1b regulatory subunit 1*ENSMUSG0000002074517
Q6PE01 / Snrnp40 / U5 small nuclear ribonucleoprotein 40 kDa protein / Q96DI7* / small nuclear ribonucleoprotein U5 subunit 40*ENSMUSG0000007408816
Wdr61 / Q9ERF3 / WD repeat domain 61 / Q9GZS3*ENSMUSG0000006155914
Daw1 / dynein assembly factor with WD repeats 1 / Q8N136*ENSMUSG0000005316111


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001895 retina homeostasis IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0060271 cilium assembly IEA
 cellular_componentGO:0000922 spindle pole ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005814 centriole ISS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0036064 ciliary basal body IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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