ENSGALG00000035493


Gallus gallus

Features
Gene ID: ENSGALG00000035493
  
Biological name :POC1B
  
Synonyms : POC1B / POC1 centriolar protein homolog B
  
Possible biological names infered from orthology : POC1 centriolar protein B / Q8BHD1 / Q8TC44
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 43326703
Gene end: 43370334
  
Corresponding Affymetrix probe sets: GgaAffx.11647.1.S1_s_at (Chicken Array)   GgaAffx.7121.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048326
Ensembl peptide - ENSGALP00000058868
Ensembl peptide - ENSGALP00000053704
NCBI entrez gene - 417889     See in Manteia.
RefSeq - NM_001006232
RefSeq - XM_015281940
RefSeq Peptide - NP_001006232
swissprot - A0A1L1RJD9
swissprot - A0A1D5PLI7
swissprot - A0A1D5P6J9
Ensembl - ENSGALG00000035493
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 poc1bENSDARG00000021110Danio rerio
 POC1BENSG00000139323Homo sapiens
 Poc1bENSMUSG00000019952Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
POC1A / POC1 centriolar protein A / Q8JZX3* / Q8NBT0*ENSGALG0000003457250
WDR5 / WD repeat-containing protein 5 / WDR5B* / Q9D7H2* / P61964* / P61965* / Q86VZ2* / WD repeat domain 5* / WD repeat domain 5B*ENSGALG0000000265921
Q9PTR5 / PAFAH1B1 / Lissencephaly-1 homolog / P43034* / P63005* / platelet-activating factor acetylhydrolase, isoform 1b, subunit 1* / platelet activating factor acetylhydrolase 1b regulat...ENSGALG0000000583420
KATNB1 / Q5ZIU8 / Katanin p80 WD40 repeat-containing subunit B1 / Q9BVA0* / Q8BG40* / katanin regulatory subunit B1*ENSGALG0000003437320
DAW1 / dynein assembly factor with WD repeats 1 / Q8N136*ENSGALG0000000299217
SNRNP40 / U5 small nuclear ribonucleoprotein 40 kDa protein / Q6PE01* / Q96DI7* / small nuclear ribonucleoprotein U5 subunit 40*ENSGALG0000000061517
WDR61 / WD repeat-containing protein 61 / Q9ERF3* / Q9GZS3* / WD repeat domain 61*ENSGALG0000000322113
NLE1* / Q8VEJ4* / Q9NVX2* / notchless homolog 1* / Notchless protein homolog 1 *ENSGALG0000000469111
NLE1* / Q8VEJ4* / Q9NVX2* / notchless homolog 1* / Notchless protein homolog 1 *ENSGALG000000369638


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001895 retina homeostasis IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0060271 cilium assembly IEA
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0036064 ciliary basal body IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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