ENSGALG00000003221


Gallus gallus

Features
Gene ID: ENSGALG00000003221
  
Biological name :WDR61
  
Synonyms : WDR61 / WD repeat-containing protein 61
  
Possible biological names infered from orthology : Q9ERF3 / Q9GZS3 / WD repeat domain 61
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 3648559
Gene end: 3675771
  
Corresponding Affymetrix probe sets: Gga.12329.1.S1_at (Chicken Array)   Gga.4665.1.S1_s_at (Chicken Array)   Gga.4665.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044766
Ensembl peptide - ENSGALP00000064540
Ensembl peptide - ENSGALP00000063319
Ensembl peptide - ENSGALP00000060433
Ensembl peptide - ENSGALP00000033991
Ensembl peptide - ENSGALP00000043388
NCBI entrez gene - 415359     See in Manteia.
RefSeq - XM_015278884
RefSeq - NM_001005805
RefSeq Peptide - NP_001005805
swissprot - A0A1L1RNT2
swissprot - F1NFT8
swissprot - A0A1L1S079
swissprot - R4GMC9
swissprot - A0A1L1RWV8
Ensembl - ENSGALG00000003221
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdr61ENSDARG00000007755Danio rerio
 WDR61ENSG00000140395Homo sapiens
 Wdr61ENSMUSG00000061559Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KATNB1 / Q5ZIU8 / Katanin p80 WD40 repeat-containing subunit B1 / Q9BVA0* / Q8BG40* / katanin regulatory subunit B1*ENSGALG0000003437325
POC1A / POC1 centriolar protein A / Q8JZX3* / Q8NBT0*ENSGALG0000003457223
DAW1 / dynein assembly factor with WD repeats 1 / Q8N136*ENSGALG0000000299222
WDR5 / WD repeat-containing protein 5 / WDR5B* / Q9D7H2* / P61964* / P61965* / Q86VZ2* / WD repeat domain 5* / WD repeat domain 5B*ENSGALG0000000265922
POC1B / POC1 centriolar protein homolog B / Q8BHD1* / Q8TC44* / POC1 centriolar protein B*ENSGALG0000003549319
Q9PTR5 / PAFAH1B1 / Lissencephaly-1 homolog / P43034* / P63005* / platelet-activating factor acetylhydrolase, isoform 1b, subunit 1* / platelet activating factor acetylhydrolase 1b regulat...ENSGALG0000000583419
SNRNP40 / U5 small nuclear ribonucleoprotein 40 kDa protein / Q6PE01* / Q96DI7* / small nuclear ribonucleoprotein U5 subunit 40*ENSGALG0000000061519
NLE1* / Q8VEJ4* / Q9NVX2* / notchless homolog 1* / Notchless protein homolog 1 *ENSGALG0000000469111
NLE1* / Q8VEJ4* / Q9NVX2* / notchless homolog 1* / Notchless protein homolog 1 *ENSGALG0000003696310


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter IEA
 biological_processGO:0045638 negative regulation of myeloid cell differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0051571 positive regulation of histone H3-K4 methylation IEA
 biological_processGO:0080182 histone H3-K4 trimethylation IEA
 biological_processGO:2001162 positive regulation of histone H3-K79 methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016593 Cdc73/Paf1 complex IEA
 cellular_componentGO:0035327 transcriptionally active chromatin IEA
 cellular_componentGO:0055087 Ski complex IEA


Pathways (from Reactome)
Pathway description
mRNA decay by 3 to 5 exoribonuclease
RNA Polymerase II Pre-transcription Events
RNA Polymerase II Transcription Elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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