ENSGALG00000034572


Gallus gallus

Features
Gene ID: ENSGALG00000034572
  
Biological name :POC1A
  
Synonyms : POC1A / POC1 centriolar protein A
  
Possible biological names infered from orthology : Q8JZX3 / Q8NBT0
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 133147
Gene end: 204669
  
Corresponding Affymetrix probe sets: Gga.12410.1.S1_at (Chicken Array)   Gga.9976.1.S1_at (Chicken Array)   Gga.9976.1.S1_s_at (Chicken Array)   GgaAffx.24211.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045876
Ensembl peptide - ENSGALP00000061315
Ensembl peptide - ENSGALP00000056542
Ensembl peptide - ENSGALP00000047315
NCBI entrez gene - 415889     See in Manteia.
RefSeq - XM_015292743
RefSeq - XM_015292739
RefSeq - XM_015292740
RefSeq - XM_015292741
RefSeq - XM_015292742
RefSeq - XM_015292738
swissprot - A0A1D5PUD9
swissprot - A0A1D5P3R0
swissprot - A0A1D5NZQ8
swissprot - A0A1L1RR77
Ensembl - ENSGALG00000034572
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 poc1aENSDARG00000078533Danio rerio
 POC1AENSG00000164087Homo sapiens
 Poc1aENSMUSG00000023345Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
POC1B / POC1 centriolar protein homolog B / Q8BHD1* / Q8TC44* / POC1 centriolar protein B*ENSGALG0000003549358
KATNB1 / Q5ZIU8 / Katanin p80 WD40 repeat-containing subunit B1 / Q9BVA0* / Q8BG40* / katanin regulatory subunit B1*ENSGALG0000003437324
Q9PTR5 / PAFAH1B1 / Lissencephaly-1 homolog / P43034* / P63005* / platelet-activating factor acetylhydrolase, isoform 1b, subunit 1* / platelet activating factor acetylhydrolase 1b regulat...ENSGALG0000000583423
DAW1 / dynein assembly factor with WD repeats 1 / Q8N136*ENSGALG0000000299221
WDR5 / WD repeat-containing protein 5 / WDR5B* / Q9D7H2* / P61964* / P61965* / Q86VZ2* / WD repeat domain 5* / WD repeat domain 5B*ENSGALG0000000265921
SNRNP40 / U5 small nuclear ribonucleoprotein 40 kDa protein / Q6PE01* / Q96DI7* / small nuclear ribonucleoprotein U5 subunit 40*ENSGALG0000000061519
WDR61 / WD repeat-containing protein 61 / Q9ERF3* / Q9GZS3* / WD repeat domain 61*ENSGALG0000000322118
NLE1* / Q8VEJ4* / Q9NVX2* / notchless homolog 1* / Notchless protein homolog 1 *ENSGALG0000000469113
NLE1* / Q8VEJ4* / Q9NVX2* / notchless homolog 1* / Notchless protein homolog 1 *ENSGALG000000369638


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003431 growth plate cartilage chondrocyte development IEA
 biological_processGO:0007052 mitotic spindle organization IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0010825 positive regulation of centrosome duplication IEA
 biological_processGO:0060348 bone development IEA
 biological_processGO:1905515 non-motile cilium assembly IEA
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0036064 ciliary basal body IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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