ENSG00000164087


Homo sapiens

Features
Gene ID: ENSG00000164087
  
Biological name :POC1A
  
Synonyms : POC1A / POC1 centriolar protein A / Q8NBT0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p21.2
Gene start: 52075253
Gene end: 52154690
  
Corresponding Affymetrix probe sets: 226355_at (Human Genome U133 Plus 2.0 Array)   234749_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000296484
Ensembl peptide - ENSP00000378421
Ensembl peptide - ENSP00000418968
NCBI entrez gene - 25886     See in Manteia.
OMIM - 614783
RefSeq - XM_017006104
RefSeq - NM_001161580
RefSeq - NM_001161581
RefSeq - NM_015426
RefSeq - XM_011533562
RefSeq - XM_011533563
RefSeq - XM_011533564
RefSeq - XM_011533565
RefSeq - XM_011533560
RefSeq - XM_011533561
RefSeq Peptide - NP_001155053
RefSeq Peptide - NP_056241
RefSeq Peptide - NP_001155052
swissprot - Q8NBT0
Ensembl - ENSG00000164087
  
Related genetic diseases (OMIM): 614813 - Short stature, onychodysplasia, facial dysmorphism, and hypotrichosis, 614813
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 poc1aENSDARG00000078533Danio rerio
 POC1AENSGALG00000034572Gallus gallus
 Poc1aENSMUSG00000023345Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
POC1B / Q8TC44 / POC1 centriolar protein BENSG0000013932358
NLE1 / Q9NVX2 / notchless homolog 1ENSG0000007353624
P43034 / PAFAH1B1 / platelet activating factor acetylhydrolase 1b regulatory subunit 1ENSG0000000716823
WDR5 / P61964 / WD repeat domain 5ENSG0000019636323
KATNB1 / Q9BVA0 / katanin regulatory subunit B1ENSG0000014085422
WDR38 / Q5JTN6 / WD repeat domain 38ENSG0000013691821
Q96DI7 / SNRNP40 / small nuclear ribonucleoprotein U5 subunit 40ENSG0000006068821
WDR5B / Q86VZ2 / WD repeat domain 5BENSG0000019698121
DAW1 / Q8N136 / dynein assembly factor with WD repeats 1ENSG0000012397720
WDR61 / Q9GZS3 / WD repeat domain 61ENSG0000014039516


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003431 growth plate cartilage chondrocyte development IEA
 biological_processGO:0007052 mitotic spindle organization IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0010825 positive regulation of centrosome duplication IEA
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0060348 bone development IEA
 biological_processGO:1905515 non-motile cilium assembly IEA
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0036064 ciliary basal body IDA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000060 Hypoplastic clitoris 
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 HP:0000164 Abnormality of the teeth "Any abnormality of the primary (deciduous) or permanent teeth." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000276 Long face 
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 HP:0000303 Mandibular prognathia "Abnormal prominence of the chin related to an abnormally long mandible." [HPO:curators]
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 HP:0000307 Pointed chin 
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 HP:0000316 Hypertelorism 
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 HP:0000325 Triangular facies 
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 HP:0000448 Prominent nose 
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 HP:0000490 Deep set eyes 
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 HP:0000798 Oligospermia 
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 HP:0000819 Diabetes mellitus 
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 HP:0001156 Brachydactyly 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001518 Low birth weight 
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 HP:0001620 High pitched voice 
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 HP:0001792 Nail hypoplasia "Underdeveloped `fingernails` (FMA:54327) or `toenails` (FMA:54328)." [HPO:probinson]
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 HP:0002164 Nail dysplasia 
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 HP:0002376 Developmental regression 
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 HP:0002515 Waddling gait 
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 HP:0003187 Breast hypoplasia 
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 HP:0003498 Short stature, disproportionate 
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 HP:0004590 Hypoplastic sacrum 
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 HP:0008070 Sparse hair 
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 HP:0008551 Underdeveloped ears 
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 HP:0008839 Hypoplastic pelvis 
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 HP:0009882 Hypoplasia of the distal phalanges of the hand 
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 HP:0010049 Hypoplastic/short metacarpal bones 
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 HP:0010579 Cone-shaped epiphyses 
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 HP:0010743 Hypoplasia of the metatarsal bones 
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0030084 Clinodactyly "An angulation of a digit at an interphalangeal joint in the plane of the palm (finger) or sole (toe)." [pmid:16252026]
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 HP:0100864 Hypoplasia of the femoral neck 
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 HP:0200055 Small hands 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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