ENSMUSG00000020333


Mus musculus

Features
Gene ID: ENSMUSG00000020333
  
Biological name :Acsl6
  
Synonyms : Acsl6 / Long-chain-fatty-acid--CoA ligase 6 / Q91WC3
  
Possible biological names infered from orthology : AC026398.1 / acyl-CoA synthetase long chain family member 6 / Q9UKU0
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B1.3
Gene start: 54303798
Gene end: 54364756
  
Corresponding Affymetrix probe sets: 10376096 (MoGene1.0st)   1437031_at (Mouse Genome 430 2.0 Array)   1451257_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000119714
Ensembl peptide - ENSMUSP00000117128
Ensembl peptide - ENSMUSP00000120540
Ensembl peptide - ENSMUSP00000120693
Ensembl peptide - ENSMUSP00000000145
Ensembl peptide - ENSMUSP00000069844
Ensembl peptide - ENSMUSP00000072040
Ensembl peptide - ENSMUSP00000090795
Ensembl peptide - ENSMUSP00000091746
Ensembl peptide - ENSMUSP00000098771
Ensembl peptide - ENSMUSP00000098773
Ensembl peptide - ENSMUSP00000104527
Ensembl peptide - ENSMUSP00000104532
Ensembl peptide - ENSMUSP00000104533
NCBI entrez gene - 216739     See in Manteia.
MGI - MGI:894291
RefSeq - XM_017314444
RefSeq - NM_001033597
RefSeq - NM_001033598
RefSeq - NM_001033599
RefSeq - NM_144823
RefSeq - XM_006532843
RefSeq - XM_006532844
RefSeq - XM_006532845
RefSeq Peptide - NP_001028769
RefSeq Peptide - NP_001028770
RefSeq Peptide - NP_001028771
RefSeq Peptide - NP_659072
swissprot - Q5F2C5
swissprot - Q5F2D0
swissprot - Q5ICG4
swissprot - Q5ICG5
swissprot - Q8BYJ0
swissprot - E9Q7Y2
swissprot - F6WYN6
swissprot - B1ARG5
swissprot - Q8C028
swissprot - Q8R1X1
swissprot - Q91WC3
swissprot - B0QZJ6
Ensembl - ENSMUSG00000020333
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LO018363.1ENSDARG00000099648Danio rerio
 LO018363.2ENSDARG00000113657Danio rerio
 ENSGALG00000006644Gallus gallus
 AC026398.1ENSG00000281938Homo sapiens
 ACSL6ENSG00000164398Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Acsl1 / P41216 / Long-chain-fatty-acid--CoA ligase 1 / P33121* / acyl-CoA synthetase long chain family member 1*ENSMUSG0000001879663
Acsl5 / Q8JZR0 / Long-chain-fatty-acid--CoA ligase 5 / Q9ULC5* / acyl-CoA synthetase long chain family member 5*ENSMUSG0000002498156
Acsl3 / Q9CZW4 / Long-chain-fatty-acid--CoA ligase 3 / O95573* / acyl-CoA synthetase long chain family member 3*ENSMUSG0000003288330
Acsl4 / Q9QUJ7 / Long-chain-fatty-acid--CoA ligase 4 / O60488* / acyl-CoA synthetase long chain family member 4*ENSMUSG0000003127828
Acsbg1 / Q99PU5 / acyl-CoA synthetase bubblegum family member 1 / Q96GR2*ENSMUSG0000003228123
Acsbg2 / Q2XU92 / acyl-CoA synthetase bubblegum family member 2 / Q5FVE4*ENSMUSG0000002420721
1700061G19Rik / RIKEN cDNA 1700061G19 geneENSMUSG0000002420918


Protein motifs (from Interpro)
Interpro ID Name
 IPR000873  AMP-dependent synthetase/ligase
 IPR020845  AMP-binding, conserved site
 IPR025110  AMP-binding enzyme, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001676 long-chain fatty acid metabolic process ISO
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0007405 neuroblast proliferation IDA
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0005778 peroxisomal membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031090 organelle membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004467 long-chain fatty acid-CoA ligase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0019899 enzyme binding ISO
 molecular_functionGO:0042803 protein homodimerization activity ISO
 molecular_functionGO:0102391 decanoate-CoA ligase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of very long-chain fatty acyl-CoAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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