ENSMUSG00000021039


Mus musculus

Features
Gene ID: ENSMUSG00000021039
  
Biological name :Snw1
  
Synonyms : Snw1 / SNW domain containing 1
  
Possible biological names infered from orthology : Q13573
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: D2
Gene start: 87449075
Gene end: 87472274
  
Corresponding Affymetrix probe sets: 10401805 (MoGene1.0st)   1429002_at (Mouse Genome 430 2.0 Array)   1429003_at (Mouse Genome 430 2.0 Array)   1459026_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000021428
NCBI entrez gene - 66354     See in Manteia.
MGI - MGI:1913604
RefSeq - NM_025507
RefSeq Peptide - NP_079783
swissprot - A0A0B4J1E2
Ensembl - ENSMUSG00000021039
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snw1ENSDARG00000091563Danio rerio
 SNW1ENSGALG00000010501Gallus gallus
 SNW1ENSG00000100603Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004015  SKI-interacting protein SKIP, SNW domain
 IPR017862  SKI-interacting protein, SKIP


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0014010 Schwann cell proliferation IEA
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0071141 SMAD protein complex IEA


Pathways (from Reactome)
Pathway description
NOTCH1 Intracellular Domain Regulates Transcription
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
Notch-HLH transcription pathway
mRNA Splicing - Major Pathway
RUNX3 regulates NOTCH signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000016327 Atp1b4 / Q99ME6 / Protein ATP1B4 / Q9UN42* / ATPase Na+/K+ transporting family member beta 4*  / reaction / complex
 ENSMUSG00000026923 Notch1 / Q01705 / Neurogenic locus notch homolog protein 1 Notch 1 extracellular truncation Notch 1 intracellular domain / P46531*  / complex
 ENSMUSG00000039191 Rbpj / P31266 / Recombining binding protein suppressor of hairless / Q06330* / recombination signal binding protein for immunoglobulin kappa J region*  / complex






 

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