ENSMUSG00000024422


Mus musculus

Features
Gene ID: ENSMUSG00000024422
  
Biological name :Dhx16
  
Synonyms : DEAH-box helicase 16 / Dhx16
  
Possible biological names infered from orthology : O60231
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: B1
Gene start: 35879819
Gene end: 35892670
  
Corresponding Affymetrix probe sets: 10444936 (MoGene1.0st)   1423925_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000025292
Ensembl peptide - ENSMUSP00000133818
Ensembl peptide - ENSMUSP00000133888
NCBI entrez gene - 69192     See in Manteia.
MGI - MGI:1916442
RefSeq - XM_006524873
RefSeq - NM_026987
RefSeq Peptide - NP_081263
swissprot - G3UXT5
swissprot - Q05BH3
swissprot - G3X8X0
Ensembl - ENSMUSG00000024422
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dhx16ENSDARG00000013150Danio rerio
 DHX16ENSG00000204560Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Dhx8 / A2A4P0 / ATP-dependent RNA helicase DHX8 / Q14562* / DEAH-box helicase 8*ENSMUSG0000003493143
Dhx38 / DEAH-box helicase 38 / Q92620*ENSMUSG0000003799337
Dhx15 / O35286 / Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 / O43143* / DEAH-box helicase 15*ENSMUSG0000002916934
Dhx35 / probable ATP-dependent RNA helicase DHX35 isoform b / Q9H5Z1* / DEAH-box helicase 35*ENSMUSG0000002765530
Dhx33 / Q80VY9 / Putative ATP-dependent RNA helicase DHX33 / Q9H6R0* / DEAH-box helicase 33*ENSMUSG0000004062029
Dhx40 / Q6PE54 / Probable ATP-dependent RNA helicase DHX40 / Q8IX18* / DEAH-box helicase 40*ENSMUSG0000001842527
Dhx34 / DExH-box helicase 34 / Q14147*ENSMUSG0000000601924
Cltc / Q68FD5 / Mus musculus clathrin, heavy polypeptide (Hc) (Cltc), transcript variant 1, mRNA.ENSMUSG0000004712615


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR002464  DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
 IPR007502  Helicase-associated domain
 IPR011545  DEAD/DEAH box helicase domain
 IPR011709  Domain of unknown function DUF1605
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005681 spliceosomal complex ISO
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016887 ATPase activity ISO


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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