ENSMUSG00000029169


Mus musculus

Features
Gene ID: ENSMUSG00000029169
  
Biological name :Dhx15
  
Synonyms : Dhx15 / O35286 / Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
  
Possible biological names infered from orthology : DEAH-box helicase 15 / O43143
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: C1
Gene start: 52150203
Gene end: 52190514
  
Corresponding Affymetrix probe sets: 10529995 (MoGene1.0st)   1416144_a_at (Mouse Genome 430 2.0 Array)   1416145_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000143381
Ensembl peptide - ENSMUSP00000143658
Ensembl peptide - ENSMUSP00000031061
Ensembl peptide - ENSMUSP00000143069
NCBI entrez gene - 13204     See in Manteia.
MGI - MGI:1099786
RefSeq - NM_001042620
RefSeq - NM_007839
RefSeq Peptide - NP_031865
RefSeq Peptide - NP_001036085
swissprot - A0A0G2JGQ5
swissprot - Q497W9
swissprot - A0A0G2JG10
swissprot - O35286
swissprot - Q3UKJ6
Ensembl - ENSMUSG00000029169
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dhx15ENSDARG00000015392Danio rerio
 DHX15ENSGALG00000014395Gallus gallus
 DHX15ENSG00000109606Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Dhx8 / A2A4P0 / ATP-dependent RNA helicase DHX8 / Q14562* / DEAH-box helicase 8*ENSMUSG0000003493147
Dhx16 / DEAH-box helicase 16 / O60231*ENSMUSG0000002442245
Dhx38 / DEAH-box helicase 38 / Q92620*ENSMUSG0000003799340
Dhx35 / probable ATP-dependent RNA helicase DHX35 isoform b / Q9H5Z1* / DEAH-box helicase 35*ENSMUSG0000002765536
Dhx33 / Q80VY9 / Putative ATP-dependent RNA helicase DHX33 / Q9H6R0* / DEAH-box helicase 33*ENSMUSG0000004062035
Dhx40 / Q6PE54 / Probable ATP-dependent RNA helicase DHX40 / Q8IX18* / DEAH-box helicase 40*ENSMUSG0000001842534
Dhx34 / DExH-box helicase 34 / Q14147*ENSMUSG0000000601930
Cltc / Q68FD5 / Mus musculus clathrin, heavy polypeptide (Hc) (Cltc), transcript variant 1, mRNA.ENSMUSG0000004712618


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR002464  DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
 IPR007502  Helicase-associated domain
 IPR011545  DEAD/DEAH box helicase domain
 IPR011709  Domain of unknown function DUF1605
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0009636 response to toxic substance IEA
 biological_processGO:0043279 response to alkaloid IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005681 spliceosomal complex IBA
 cellular_componentGO:0005689 U12-type spliceosomal complex IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0071008 U2-type post-mRNA release spliceosomal complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003725 double-stranded RNA binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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