ENSMUSG00000025511


Mus musculus

Features
Gene ID: ENSMUSG00000025511
  
Biological name :Tspan4
  
Synonyms : Q9DCK3 / tetraspanin 4 / Tspan4
  
Possible biological names infered from orthology : O14817
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: F5
Gene start: 141475240
Gene end: 141493427
  
Corresponding Affymetrix probe sets: 10558961 (MoGene1.0st)   1448276_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000113085
Ensembl peptide - ENSMUSP00000118936
Ensembl peptide - ENSMUSP00000118533
Ensembl peptide - ENSMUSP00000115421
Ensembl peptide - ENSMUSP00000026585
NCBI entrez gene - 64540     See in Manteia.
MGI - MGI:1928097
RefSeq - XM_006536224
RefSeq - NM_001252588
RefSeq - NM_053082
RefSeq Peptide - NP_444312
RefSeq Peptide - NP_001239517
swissprot - D3Z0B7
swissprot - Q9DCK3
swissprot - Q4FJW7
swissprot - D3YXS4
swissprot - D3Z0T3
Ensembl - ENSMUSG00000025511
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tspan4aENSDARG00000089354Danio rerio
 TSPAN4ENSGALG00000006837Gallus gallus
 O14817ENSG00000214063Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BJU2 / Tspan9 / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA. / O75954* / tetraspanin 9*ENSMUSG0000003035256
Cd53 / Q61451 / Leukocyte surface antigen CD53 / P19397* / CD53 molecule*ENSMUSG0000004074736
Cd82 / P40237 / CD82 antigen / P27701* / CD82 molecule*ENSMUSG0000002721533
Q8R3G9 / Tspan8 / Tetraspanin-8 / P19075*ENSMUSG0000003412730
Q922J6 / Tspan2 / tetraspanin 2 / O60636*ENSMUSG0000002785828
Q80WR1 / Tspan18 / Tetraspanin-18 / Q96SJ8*ENSMUSG0000002721728
Q99J59 / Tspan1 / Tetraspanin-1 / O60635*ENSMUSG0000002869927
Cd37 / Q61470 / Leukocyte antigen CD37 / P11049* / CD37 molecule*ENSMUSG0000003079826
Cd9 / P40240 / CD9 antigen / P21926* / CD9 molecule*ENSMUSG0000003034225
Cd81 / P35762 / CD81 antigen / P60033* / CD81 molecule*ENSMUSG0000003770623


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin
 IPR018503  Tetraspanin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0065003 protein-containing complex assembly IEA
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031982 vesicle ISO
 molecular_functionGO:0003823 antigen binding ISO
 molecular_functionGO:0005178 integrin binding ISO
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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