ENSMUSG00000030352


Mus musculus

Features
Gene ID: ENSMUSG00000030352
  
Biological name :Tspan9
  
Synonyms : Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA. / Q8BJU2 / Tspan9
  
Possible biological names infered from orthology : O75954 / tetraspanin 9
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: F3
Gene start: 127961396
Gene end: 128143594
  
Corresponding Affymetrix probe sets: 10548128 (MoGene1.0st)   1428197_at (Mouse Genome 430 2.0 Array)   1441968_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000107796
Ensembl peptide - ENSMUSP00000144650
Ensembl peptide - ENSMUSP00000143827
Ensembl peptide - ENSMUSP00000116142
Ensembl peptide - ENSMUSP00000115922
Ensembl peptide - ENSMUSP00000115324
Ensembl peptide - ENSMUSP00000114763
Ensembl peptide - ENSMUSP00000032503
Ensembl peptide - ENSMUSP00000107794
NCBI entrez gene - 109246     See in Manteia.
MGI - MGI:1924558
RefSeq - XM_006505335
RefSeq - NM_001356301
RefSeq - NM_175414
RefSeq - XM_006505330
RefSeq - XM_006505332
RefSeq - XM_006505333
RefSeq Peptide - NP_780623
RefSeq Peptide - NP_001343230
swissprot - D3YV18
swissprot - D3YU98
swissprot - A0A0J9YVG5
swissprot - A0A0J9YTS4
swissprot - Q8BJU2
swissprot - D3YXN7
swissprot - D3Z6M6
Ensembl - ENSMUSG00000030352
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6GMK6ENSDARG00000045706Danio rerio
 tspan9aENSDARG00000025299Danio rerio
 TSPAN9ENSGALG00000014346Gallus gallus
 O75954ENSG00000011105Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9DCK3 / Tspan4 / tetraspanin 4 / O14817*ENSMUSG0000002551156
Cd53 / Q61451 / Leukocyte surface antigen CD53 / P19397* / CD53 molecule*ENSMUSG0000004074738
Q80WR1 / Tspan18 / Tetraspanin-18 / Q96SJ8*ENSMUSG0000002721733
Cd82 / P40237 / CD82 antigen / P27701* / CD82 molecule*ENSMUSG0000002721531
Q8R3G9 / Tspan8 / Tetraspanin-8 / P19075*ENSMUSG0000003412729
Q99J59 / Tspan1 / Tetraspanin-1 / O60635*ENSMUSG0000002869929
Cd81 / P35762 / CD81 antigen / P60033* / CD81 molecule*ENSMUSG0000003770626
Cd37 / Q61470 / Leukocyte antigen CD37 / P11049* / CD37 molecule*ENSMUSG0000003079826
Cd9 / P40240 / CD9 antigen / P21926* / CD9 molecule*ENSMUSG0000003034226
Q922J6 / Tspan2 / tetraspanin 2 / O60636*ENSMUSG0000002785826


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin
 IPR018503  Tetraspanin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0097197 tetraspanin-enriched microdomain ISO
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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