ENSMUSG00000028040


Mus musculus

Features
Gene ID: ENSMUSG00000028040
  
Biological name :Efna4
  
Synonyms : Efna4 / Ephrin-A4 / O08542
  
Possible biological names infered from orthology : P52798
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: F1
Gene start: 89333390
Gene end: 89338028
  
Corresponding Affymetrix probe sets: 10499552 (MoGene1.0st)   1421784_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000029674
NCBI entrez gene - 13639     See in Manteia.
MGI - MGI:106643
RefSeq - NM_007910
RefSeq Peptide - NP_031936
swissprot - O08542
swissprot - Q3UQB5
Ensembl - ENSMUSG00000028040
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-246i14.3ENSDARG00000090427Danio rerio
 EFNA4ENSG00000243364Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Efna3 / O08545 / Ephrin-A3 / P52797*ENSMUSG0000002803943
Efna2 / P52801 / Ephrin-A2 / O43921*ENSMUSG0000000307037
Efna5 / O08543 / Ephrin-A5 / P52803*ENSMUSG0000004891535
Efna1 / P52793 / Ephrin-A1 Ephrin-A1, secreted form / P20827* / ephrin A1*ENSMUSG0000002795434


Protein motifs (from Interpro)
Interpro ID Name
 IPR001799  Ephrin receptor-binding domain
 IPR008972  Cupredoxin
 IPR019765  Ephrin, conserved site
 IPR031328  Ephrin
 IPR034252  Ephrin-A ectodomain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007411 axon guidance IBA
 biological_processGO:0030316 osteoclast differentiation IBA
 biological_processGO:0046849 bone remodeling IBA
 biological_processGO:0048013 ephrin receptor signaling pathway IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 molecular_functionGO:0046875 ephrin receptor binding ISO


Pathways (from Reactome)
Pathway description
EPH-Ephrin signaling
EPHA-mediated growth cone collapse
EPH-ephrin mediated repulsion of cells


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr