ENSMUSG00000033082


Mus musculus

Features
Gene ID: ENSMUSG00000033082
  
Biological name :Clec1a
  
Synonyms : Clec1a / C-type lectin domain family 1 member A / Q8BWY2
  
Possible biological names infered from orthology : Q8NC01
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: F3
Gene start: 129424772
Gene end: 129452000
  
Corresponding Affymetrix probe sets: 10548367 (MoGene1.0st)   1456318_at (Mouse Genome 430 2.0 Array)   1460039_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000047065
Ensembl peptide - ENSMUSP00000145497
Ensembl peptide - ENSMUSP00000145071
Ensembl peptide - ENSMUSP00000144896
NCBI entrez gene - 243653     See in Manteia.
MGI - MGI:2444151
RefSeq - XM_006506120
RefSeq - NM_175526
RefSeq Peptide - NP_001334404
RefSeq Peptide - NP_780735
swissprot - A0A0N4SVE6
swissprot - A0A0N4SWF3
swissprot - Q8BWY2
swissprot - A0A0N4SV03
Ensembl - ENSMUSG00000033082
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLEC1AENSG00000150048Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Clec12b / C-type lectin domain family 12 member B / Q2HXU8*ENSMUSG0000003015832
Clec1b / Q9JL99 / C-type lectin domain family 1 member B / Q9P126*ENSMUSG0000003015929
Clec9a / Q8BRU4 / C-type lectin domain family 9 member A / Q6UXN8* / C-type lectin domain containing 9A*ENSMUSG0000004608022
Olr1 / Q9EQ09 / Oxidized low-density lipoprotein receptor 1 Oxidized low-density lipoprotein receptor 1, soluble form / P78380* / oxidized low density lipoprotein receptor 1*ENSMUSG0000003016222
Clec12a / Q5QGZ9* / C-type lectin domain family 12 member A*ENSMUSG0000005306322
Clec7a / Q6QLQ4 / Mus musculus C-type lectin domain family 7, member a (Clec7a), transcript variant 1, coding, mRNA. / Q9BXN2* / C-type lectin domain containing 7A*ENSMUSG0000007929319


Protein motifs (from Interpro)
Interpro ID Name
 IPR001304  C-type lectin-like
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR033992  Natural killer cell receptor-like, C-type lectin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr