ENSMUSG00000034463


Mus musculus

Features
Gene ID: ENSMUSG00000034463
  
Biological name :Scara3
  
Synonyms : Q8C850 / Scara3 / Scavenger receptor class A member 3
  
Possible biological names infered from orthology : Q6AZY7
  
Species: Mus musculus
  
Chr. number: 14
Strand: -1
Band: D1
Gene start: 65919394
Gene end: 65953935
  
Corresponding Affymetrix probe sets: 10420891 (MoGene1.0st)   1427020_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000046525
NCBI entrez gene - 219151     See in Manteia.
MGI - MGI:2444418
RefSeq - NM_172604
RefSeq - XM_017315980
RefSeq Peptide - NP_766192
swissprot - Q8C850
Ensembl - ENSMUSG00000034463
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scara3ENSDARG00000008060Danio rerio
 SCARA3ENSGALG00000026651Gallus gallus
 Q6AZY7ENSG00000168077Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8K4Q8 / Colec12 / Collectin-12 / Q5KU26* / collectin subfamily member 12*ENSMUSG0000003610333
Q07563 / Col17a1 / Collagen alpha-1(XVII) chain 120 kDa linear IgA disease antigen homolog / Q9UMD9* / collagen type XVII alpha 1 chain*ENSMUSG0000002506421
Q2UY11 / Col28a1 / Collagen alpha-1(XXVIII) chain / Q2UY09* / collagen type XXVIII alpha 1 chain*ENSMUSG0000006879417
Col6a1 / Q04857 / Collagen alpha-1(VI) chain / P12109* / collagen type VI alpha 1 chain*ENSMUSG0000000111917
Col6a2 / Q02788 / Mus musculus collagen, type VI, alpha 2 (Col6a2), transcript variant 2, mRNA. / P12110* / collagen type VI alpha 2 chain*ENSMUSG0000002024117
Colq / O35348 / Acetylcholinesterase collagenic tail peptide / Q9Y215* / collagen like tail subunit of asymmetric acetylcholinesterase*ENSMUSG0000005760612


Protein motifs (from Interpro)
Interpro ID Name
 IPR008160  Collagen triple helix repeat
 IPR016133  Insect cysteine-rich antifreeze protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005783 endoplasmic reticulum ISO
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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