ENSG00000168077


Homo sapiens

Features
Gene ID: ENSG00000168077
  
Biological name :SCARA3
  
Synonyms : Q6AZY7 / SCARA3 / scavenger receptor class A member 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: p21.1
Gene start: 27633868
Gene end: 27676776
  
Corresponding Affymetrix probe sets: 219416_at (Human Genome U133 Plus 2.0 Array)   223842_s_at (Human Genome U133 Plus 2.0 Array)   223843_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000301904
Ensembl peptide - ENSP00000337985
NCBI entrez gene - 51435     See in Manteia.
OMIM - 602728
RefSeq - XM_017013537
RefSeq - NM_016240
RefSeq - NM_182826
RefSeq - XM_017013535
RefSeq - XM_017013536
RefSeq Peptide - NP_057324
RefSeq Peptide - NP_878185
swissprot - Q6AZY7
Ensembl - ENSG00000168077
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scara3ENSDARG00000008060Danio rerio
 SCARA3ENSGALG00000026651Gallus gallus
 Q8C850ENSMUSG00000034463Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5KU26 / COLEC12 / collectin subfamily member 12ENSG0000015827034
Q9UMD9 / COL17A1 / collagen type XVII alpha 1 chainENSG0000006561821
Q2UY09 / COL28A1 / collagen type XXVIII alpha 1 chainENSG0000021501817
COL6A1 / P12109 / collagen type VI alpha 1 chainENSG0000014215617
COL6A2 / P12110 / collagen type VI alpha 2 chainENSG0000014217316
COLQ / Q9Y215 / collagen like tail subunit of asymmetric acetylcholinesteraseENSG0000020656111


Protein motifs (from Interpro)
Interpro ID Name
 IPR008160  Collagen triple helix repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 biological_processGO:0006979 response to oxidative stress TAS
 biological_processGO:0009650 UV protection TAS
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005044 scavenger receptor activity TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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