ENSDARG00000008060


Danio rerio

Features
Gene ID: ENSDARG00000008060
  
Biological name :scara3
  
Synonyms : scara3 / scavenger receptor class A, member 3
  
Possible biological names infered from orthology : Q6AZY7 / Q8C850
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 39283849
Gene end: 39300730
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000027281
Ensembl peptide - ENSDARP00000117784
NCBI entrez gene - 564588     See in Manteia.
swissprot - E9QDK3
swissprot - Q5SPR1
ZFIN ID - ZDB-GENE-041014-317
Ensembl - ENSDARG00000008060
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCARA3ENSGALG00000026651Gallus gallus
 Q6AZY7ENSG00000168077Homo sapiens
 Q8C850ENSMUSG00000034463Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A5PMY6 / colec12 / collectin sub-family member 12 / Q8K4Q8* / Q5KU26* / Collectin-12 * / collectin subfamily member 12*ENSDARG0000006114031
col17a1b / collagen, type XVII, alpha 1b / Q9UMD9* / Q07563* / COL17A1* / collagen type XVII alpha 1 chain* / Collagen alpha-1(XVII) chain 120 kDa linear IgA disease antigen homolog*ENSDARG0000007901117
col28a2b / collagen, type XXVIII, alpha 2bENSDARG0000010078115
col28a1a / collagen, type XXVIII, alpha 1a / Q2UY11* / Q2UY09* / COL28A1* / Collagen alpha-1(XXVIII) chain * / collagen type XXVIII alpha 1 chain*ENSDARG0000007708415
col17a1a / collagen, type XVII, alpha 1a / Q9UMD9* / Q07563* / COL17A1* / collagen type XVII alpha 1 chain* / Collagen alpha-1(XVII) chain 120 kDa linear IgA disease antigen homolog*ENSDARG0000006941515
col28a2a / collagen, type XXVIII, alpha 2aENSDARG0000007632115
col28a1b / collagen, type XXVIII, alpha 1b / Q2UY09* / COL28A1* / collagen type XXVIII alpha 1 chain*ENSDARG0000008708715
col6a2 / collagen, type VI, alpha 2 / P12110* / Q02788* / collagen type VI alpha 2 chain* / Mus musculus collagen, type VI, alpha 2 (Col6a2), transcript variant 2, mRNA.*ENSDARG0000006143615
col6a1 / collagen, type VI, alpha 1 / Q04857* / P12109* / Collagen alpha-1(VI) chain * / collagen type VI alpha 1 chain*ENSDARG0000007490814
wu:fc38h03ENSDARG0000007421611
colq / collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase / O35348* / Q9Y215* / Acetylcholinesterase collagenic tail peptide * / collagen like tail ...ENSDARG0000001969210


Protein motifs (from Interpro)
Interpro ID Name
 IPR008160  Collagen triple helix repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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