ENSDARG00000019692


Danio rerio

Features
Gene ID: ENSDARG00000019692
  
Biological name :colq
  
Synonyms : collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase / colq
  
Possible biological names infered from orthology : Acetylcholinesterase collagenic tail peptide / collagen like tail subunit of asymmetric acetylcholinesterase / O35348 / Q9Y215
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 20198064
Gene end: 20238985
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000019894
Ensembl peptide - ENSDARP00000149097
NCBI entrez gene - 101886065     See in Manteia.
swissprot - F1Q7Y1
ZFIN ID - ZDB-GENE-110411-119
Ensembl - ENSDARG00000019692
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COLQENSGALG00000011202Gallus gallus
 COLQENSG00000206561Homo sapiens
 ColqENSMUSG00000057606Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
wu:fc38h03ENSDARG0000007421651
col28a1a / collagen, type XXVIII, alpha 1a / Q2UY11* / Q2UY09* / COL28A1* / Collagen alpha-1(XXVIII) chain * / collagen type XXVIII alpha 1 chain*ENSDARG0000007708428
col28a2a / collagen, type XXVIII, alpha 2aENSDARG0000007632128
col28a2b / collagen, type XXVIII, alpha 2bENSDARG0000010078127
col28a1b / collagen, type XXVIII, alpha 1b / Q2UY09* / COL28A1* / collagen type XXVIII alpha 1 chain*ENSDARG0000008708727
col6a2 / collagen, type VI, alpha 2 / P12110* / Q02788* / collagen type VI alpha 2 chain* / Mus musculus collagen, type VI, alpha 2 (Col6a2), transcript variant 2, mRNA.*ENSDARG0000006143626
col17a1b / collagen, type XVII, alpha 1b / Q9UMD9* / Q07563* / COL17A1* / collagen type XVII alpha 1 chain* / Collagen alpha-1(XVII) chain 120 kDa linear IgA disease antigen homolog*ENSDARG0000007901125
col6a1 / collagen, type VI, alpha 1 / Q04857* / P12109* / Collagen alpha-1(VI) chain * / collagen type VI alpha 1 chain*ENSDARG0000007490824
col17a1a / collagen, type XVII, alpha 1a / Q9UMD9* / Q07563* / COL17A1* / collagen type XVII alpha 1 chain* / Collagen alpha-1(XVII) chain 120 kDa linear IgA disease antigen homolog*ENSDARG0000006941522
A5PMY6 / colec12 / collectin sub-family member 12 / Q8K4Q8* / Q5KU26* / Collectin-12 * / collectin subfamily member 12*ENSDARG0000006114020
scara3 / scavenger receptor class A, member 3 / Q6AZY7*ENSDARG0000000806013


Protein motifs (from Interpro)
Interpro ID Name
 IPR008160  Collagen triple helix repeat
 IPR011936  Myxococcus cysteine-rich repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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