ENSDARG00000074216


Danio rerio

Features
Gene ID: ENSDARG00000074216
  
Biological name :wu:fc38h03
  
Synonyms : wu:fc38h03
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 19412692
Gene end: 19432928
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100904
swissprot - F1RCT5
ZFIN ID - ZDB-GENE-030131-3430
Ensembl - ENSDARG00000074216
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
colq / collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase / O35348* / Q9Y215* / Acetylcholinesterase collagenic tail peptide * / collagen like tail ...ENSDARG0000001969256
col28a1b / collagen, type XXVIII, alpha 1b / Q2UY09* / COL28A1* / collagen type XXVIII alpha 1 chain*ENSDARG0000008708731
col28a2a / collagen, type XXVIII, alpha 2aENSDARG0000007632131
col28a1a / collagen, type XXVIII, alpha 1a / Q2UY11* / Q2UY09* / COL28A1* / Collagen alpha-1(XXVIII) chain * / collagen type XXVIII alpha 1 chain*ENSDARG0000007708431
col28a2b / collagen, type XXVIII, alpha 2bENSDARG0000010078130
col6a2 / collagen, type VI, alpha 2 / P12110* / Q02788* / collagen type VI alpha 2 chain* / Mus musculus collagen, type VI, alpha 2 (Col6a2), transcript variant 2, mRNA.*ENSDARG0000006143628
col17a1b / collagen, type XVII, alpha 1b / Q9UMD9* / Q07563* / COL17A1* / collagen type XVII alpha 1 chain* / Collagen alpha-1(XVII) chain 120 kDa linear IgA disease antigen homolog*ENSDARG0000007901127
col6a1 / collagen, type VI, alpha 1 / Q04857* / P12109* / Collagen alpha-1(VI) chain * / collagen type VI alpha 1 chain*ENSDARG0000007490827
col17a1a / collagen, type XVII, alpha 1a / Q9UMD9* / Q07563* / COL17A1* / collagen type XVII alpha 1 chain* / Collagen alpha-1(XVII) chain 120 kDa linear IgA disease antigen homolog*ENSDARG0000006941526
A5PMY6 / colec12 / collectin sub-family member 12 / Q8K4Q8* / Q5KU26* / Collectin-12 * / collectin subfamily member 12*ENSDARG0000006114023
scara3 / scavenger receptor class A, member 3 / Q6AZY7*ENSDARG0000000806015


Protein motifs (from Interpro)
Interpro ID Name
 IPR008160  Collagen triple helix repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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