ENSMUSG00000035168


Mus musculus

Features
Gene ID: ENSMUSG00000035168
  
Biological name :Tanc1
  
Synonyms : Protein TANC1 / Q0VGY8 / Tanc1
  
Possible biological names infered from orthology : Q9C0D5 / tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: C1.1
Gene start: 59612042
Gene end: 59846149
  
Corresponding Affymetrix probe sets: 10472240 (MoGene1.0st)   1446029_at (Mouse Genome 430 2.0 Array)   1452714_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000036003
Ensembl peptide - ENSMUSP00000108187
Ensembl peptide - ENSMUSP00000123345
NCBI entrez gene - 66860     See in Manteia.
MGI - MGI:1914110
RefSeq - XM_017319205
RefSeq - NM_001290659
RefSeq - NM_198294
RefSeq - XM_017319201
RefSeq - XM_017319202
RefSeq - XM_017319203
RefSeq - XM_017319204
RefSeq - XM_006500034
RefSeq - XM_006500035
RefSeq - XM_006500036
RefSeq - XM_006500037
RefSeq - XM_006500039
RefSeq - XM_006500040
RefSeq - XM_017319200
RefSeq Peptide - NP_001277588
RefSeq Peptide - NP_938036
swissprot - Q0VGY8
swissprot - E9QAF9
Ensembl - ENSMUSG00000035168
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tanc1bENSDARG00000089190Danio rerio
 TANC1ENSGALG00000012570Gallus gallus
 TANC1ENSG00000115183Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tanc2 / A2A690 / Protein TANC2 / Q9HCD6* / tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2*ENSMUSG0000005358054
Ankhd1 / ankyrin repeat and KH domain containing 1 / Q8IWZ3* / ANKHD1-EIF4EBP3* / ANKHD1-EIF4EBP3 readthrough*ENSMUSG0000002448317
Q99NH0 / Ankrd17 / Ankyrin repeat domain-containing protein 17 / O75179* / ankyrin repeat domain 17*ENSMUSG0000005520416
Kidins220 / kinase D-interacting substrate 220 / Q9ULH0*ENSMUSG0000003633312
Anks6 / Q6GQX6 / Ankyrin repeat and SAM domain-containing protein 6 / Q68DC2* / ankyrin repeat and sterile alpha motif domain containing 6*ENSMUSG000000661919
Q05921 / Rnasel / ribonuclease L (2, 5-oligoisoadenylate synthetase-dependent) / Q05823* / ribonuclease L*ENSMUSG000000668007
Ankrd29 / ankyrin repeat domain 29 / Q8N6D5*ENSMUSG000000577665
Fank1 / Q9DAM9 / Fibronectin type 3 and ankyrin repeat domains 1 protein / Q8TC84* / fibronectin type III and ankyrin repeat domains 1*ENSMUSG000000531114
Ankrd50 / ankyrin repeat domain 50ENSMUSG000000448642


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007520 myoblast fusion IMP
 biological_processGO:0008542 visual learning IMP
 biological_processGO:0097062 dendritic spine maintenance IMP
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030425 dendrite IDA
 cellular_componentGO:0043025 neuronal cell body IDA
 cellular_componentGO:0043679 axon terminus IDA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0008428 abnormal spatial working memory "anomaly in the ability to spontaneously process spatial location information in order to naviagate or perform other behavior using such locational cues, without previous encounters or training at that location" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Cops5tm1Fxc/Cops5tm1Fxc
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

 MP:0009936 abnormal dendritic spine morphology "any structural anomaly of the small membranous protrusion from the dendrite of a neuron that is involved in synaptic transmission; it typically receives input from a single synapse of an axon" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Cops5tm1Fxc/Cops5tm1Fxc
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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