ENSMUSG00000053580


Mus musculus

Features
Gene ID: ENSMUSG00000053580
  
Biological name :Tanc2
  
Synonyms : A2A690 / Protein TANC2 / Tanc2
  
Possible biological names infered from orthology : Q9HCD6 / tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: E1
Gene start: 105589986
Gene end: 105929304
  
Corresponding Affymetrix probe sets: 10381934 (MoGene1.0st)   10381939 (MoGene1.0st)   1435078_at (Mouse Genome 430 2.0 Array)   1436513_at (Mouse Genome 430 2.0 Array)   1443123_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000129877
Ensembl peptide - ENSMUSP00000123674
Ensembl peptide - ENSMUSP00000147168
Ensembl peptide - ENSMUSP00000126201
Ensembl peptide - ENSMUSP00000086912
Ensembl peptide - ENSMUSP00000097904
NCBI entrez gene - 77097     See in Manteia.
MGI - MGI:2444121
RefSeq - XM_006534483
RefSeq - XM_006534475
RefSeq - XM_006534476
RefSeq - XM_006534477
RefSeq - XM_006534478
RefSeq - XM_006534480
RefSeq - XM_006534481
RefSeq - XM_006534482
RefSeq - NM_181071
RefSeq - XM_006534472
RefSeq - XM_006534473
RefSeq - XM_006534474
RefSeq Peptide - NP_851416
swissprot - F6VCI2
swissprot - F6VP19
swissprot - A2A690
swissprot - A0A140LJD2
swissprot - E9Q2K2
swissprot - F6ZIH9
Ensembl - ENSMUSG00000053580
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01063170.1ENSDARG00000107441Danio rerio
 tanc2aENSDARG00000079097Danio rerio
 ENSGALG00000045805Gallus gallus
 ENSGALG00000000478Gallus gallus
 TANC2ENSG00000170921Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tanc1 / Q0VGY8 / Protein TANC1 / Q9C0D5* / tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1*ENSMUSG0000003516850
Ankhd1 / ankyrin repeat and KH domain containing 1 / Q8IWZ3* / ANKHD1-EIF4EBP3* / ANKHD1-EIF4EBP3 readthrough*ENSMUSG0000002448315
Q99NH0 / Ankrd17 / Ankyrin repeat domain-containing protein 17 / O75179* / ankyrin repeat domain 17*ENSMUSG0000005520415
Kidins220 / kinase D-interacting substrate 220 / Q9ULH0*ENSMUSG0000003633311
Anks6 / Q6GQX6 / Ankyrin repeat and SAM domain-containing protein 6 / Q68DC2* / ankyrin repeat and sterile alpha motif domain containing 6*ENSMUSG000000661919
Q05921 / Rnasel / ribonuclease L (2, 5-oligoisoadenylate synthetase-dependent) / Q05823* / ribonuclease L*ENSMUSG000000668007
Ankrd29 / ankyrin repeat domain 29 / Q8N6D5*ENSMUSG000000577665
Fank1 / Q9DAM9 / Fibronectin type 3 and ankyrin repeat domains 1 protein / Q8TC84* / fibronectin type III and ankyrin repeat domains 1*ENSMUSG000000531114
Ankrd50 / ankyrin repeat domain 50ENSMUSG000000448642


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001701 in utero embryonic development IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011092 complete embryonic lethality "death of all organisms of a given genotype in a population within the embryonic period prior to organogenesis (Mus: prior to E14)" [MGI:csmith]
Show

Allelic Composition: Cops5tm1Fxc/Cops5tm1Fxc
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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