ENSMUSG00000035726


Mus musculus

Features
Gene ID: ENSMUSG00000035726
  
Biological name :Supt16
  
Synonyms : suppressor of Ty 16 / Supt16
  
Possible biological names infered from orthology : Q9Y5B9 / SPT16 homolog, facilitates chromatin remodeling subunit / SUPT16H
  
Species: Mus musculus
  
Chr. number: 14
Strand: -1
Band: C2
Gene start: 52160414
Gene end: 52197416
  
Corresponding Affymetrix probe sets: 10419611 (MoGene1.0st)   1419741_at (Mouse Genome 430 2.0 Array)   1449578_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000042283
NCBI entrez gene - 114741     See in Manteia.
MGI - MGI:1890948
RefSeq - NM_033618
RefSeq Peptide - NP_291096
swissprot - G3X956
Ensembl - ENSMUSG00000035726
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 supt16hENSDARG00000079949Danio rerio
 Q9Y5B9ENSG00000092201Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000994  Peptidase M24
 IPR011989  Armadillo-like helical
 IPR013719  Domain of unknown function DUF1747
 IPR013953  FACT complex subunit Spt16p/Cdc68p
 IPR029148  FACT complex subunit Spt16, N-terminal lobe domain
 IPR029149  Creatinase/Aminopeptidase P/Spt16, N-terminal
 IPR033825  FACT complex subunit SPT16
 IPR036005  Creatinase/aminopeptidase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
Formation of RNA Pol II elongation complex
RNA Polymerase II Pre-transcription Events
TP53 Regulates Transcription of DNA Repair Genes
Regulation of TP53 Activity through Phosphorylation
RNA Polymerase II Transcription Elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000024387 Csnk2b / P67871 / Casein kinase II subunit beta / P67870* / casein kinase 2 beta*  / complex / reaction
 ENSMUSG00000046707 O54833 / Csnk2a2 / Casein kinase II subunit alpha / P19784* / casein kinase 2 alpha 2*  / complex / reaction
 ENSMUSG00000027067 Ssrp1 / Q08943 / FACT complex subunit SSRP1 / Q08945* / structure specific recognition protein 1*  / reaction / complex
 ENSMUSG00000101523 Q60737 / Gm10031 / predicted pseudogene 10031 / Q8NEV1* / P68400* / CSNK2A1* / CSNK2A3* / casein kinase 2 alpha 1* / casein kinase 2 alpha 3*  / complex / reaction






 

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