ENSMUSG00000037477


Mus musculus

Features
Gene ID: ENSMUSG00000037477
  
Biological name :Tbx10
  
Synonyms : Q810F8 / T-box transcription factor TBX10 / Tbx10
  
Possible biological names infered from orthology : O75333 / T-box 10
  
Species: Mus musculus
  
Chr. number: 19
Strand: 1
Band: A
Gene start: 3992752
Gene end: 3999511
  
Corresponding Affymetrix probe sets: 10460273 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000037401
NCBI entrez gene - 109575     See in Manteia.
MGI - MGI:1261436
RefSeq - XM_006531631
RefSeq - NM_001001320
RefSeq - NM_011533
RefSeq Peptide - NP_035663
RefSeq Peptide - NP_001001320
swissprot - Q810F8
Ensembl - ENSMUSG00000037477
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000038767Gallus gallus
 TBX10ENSG00000167800Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tbx1 / T-box 1 / O43435*ENSMUSG0000000909759
Tbx18 / T-box 18 / O95935*ENSMUSG0000003241937
Tbx2 / Q60707 / T-box transcription factor TBX2 / Q13207* / T-box 2*ENSMUSG0000000009337
Tbx15 / O70306 / T-box transcription factor TBX15 / Q96SF7* / T-box 15*ENSMUSG0000002786836
Tbx3 / P70324 / T-box 3 / O15119*ENSMUSG0000001860436
Tbx4 / P70325 / T-box 4 / P57082*ENSMUSG0000000009435
Tbx22 / Q8K402 / T-box 22 / Q9Y458*ENSMUSG0000003124134
Tbx20 / Q9ES03 / T-box transcription factor TBX20 / Q9UMR3* / T-box 20*ENSMUSG0000003196534
Tbx5 / P70326 / T-box 5 / Q99593*ENSMUSG0000001826334
Tbx6 / P70327 / T-box transcription factor TBX6 / O95947* / T-box 6*ENSMUSG0000003069931


Protein motifs (from Interpro)
Interpro ID Name
 IPR001699  Transcription factor, T-box
 IPR008967  p53-like transcription factor, DNA-binding
 IPR018186  Transcription factor, T-box, conserved site
 IPR036960  T-box superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000034 abnormal vestibule morphology "malformed cavity between the semicircular canals and the cochlea of the inner ear" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:1776]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000037 abnormal lateral semicircular canal "anomaly of the lateral long bony tube of the labyrinth that is involved in the sense of balance " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, anna:Anna Anagnostopoulos, Mouse Genome Informatics Curator, smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000111 cleft palate "congenital fissure of the tissues normally uniting to form the palate" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:49840]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

Allelic Composition: Tbx10Dc/Tbx10Dc
Genetic Background: involves: C3H/HeJ

 MP:0001265 reduced body size "smaller than average body weight, height and/or length of an organism compared to controls" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:23170]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0001302 eyelids open at birth "widely open eyes instead of closed at perinatal stage" [J:51966]
Show

Allelic Composition: Kalrntm1Ppen/Kalrn+
Genetic Background: Not Specified

 MP:0001394 circling "repeated, compulsive movement in a circle; often associated with inner ear defects" [MGI:CLS, J:61295]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0001395 bi-directional circling "circling behavior exhibited in both clockwise and counterclockwise directions" [cml:Cathleen M. Lutz , Mouse Genome Informatics Curator]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0001399 hyperactivity "general restlessness or excessive movement; more frequent movement from one place to another" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409, J:57125]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0001406 abnormal gait "unusual or distinctive way of walking" [J:65038]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0001522 impaired swimming "reduced ability or inability to swim" [J:45446, J:39081]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: ArTfm/Ar+,EdaTa-25H/Eda+
Genetic Background: involves: 101/H * C3H/HeH

 MP:0002428 abnormal semicircular canal "anomaly of the organ of balance composed of three long bony tubes of the labyrinth" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0002939 head spot "the appearance of a round area of white fur on the head" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0002980 abnormal postural reflex "failure to respond with the normal extension of legs to maintain balance when the cage is tilted" [smb:Susan M. Bello , Mouse Genome Informatics Curator, J:88306]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0003069 abnormal superior semicircular canal "anomaly of the upper, superior segment of the long bony tube of the labyrinth that is involved in the sense of balance" [Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8, ava:Anna V. Anagnostopoulos, Mouse Genome Informatics Curator]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0003938 abnormal ear development "developmental anomaly of any of the structures involved in the ear or vestibular system" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0003987 small vestibular ganglion "reduced size of the vestibular ganglion or of the sensory neuron cell bodies associated with the eighth cranial nerve" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0004249 abnormal crista ampullaris morphology "anomaly in the elevation found on the inner surface of the ampullae of each semicircular duct; filaments of the vestibular nerve pass through the crista to reach hair cells on its surface; the hair cells are capped by the cupula, a gelatinous protein-polysaccharide mass" [J:60193, MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0004289 abnormal bony labyrinth "any structural abnormality in the series of cavities (cochlea, vestibule, and semicircular canals) contained within the otic capsule of the petrous portion of the temporal bone; the bony labyrinth is filled with perilymph, in which the delicate, endolymph-filled membranous labyrinth is suspended" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0004317 small saccule "reduced size of the cavity between the semicircular canals and the cochlea of the inner ear" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0004333 abnormal utricular macula morphology "any structural abnormalities in the neuroepithelial sensory receptor in the inferolateral wall of the utricle; hair cells of the neuroepithelium support the statoconial membrane and have terminal arborizations of vestibular nerve fibers around their bodies; normally sensitive to linear acceleration in the longitudinal axis of the body and to gravitational influences" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0004336 small utricle "reduced size of the larger of the two sacs in the vestibule" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0004427 abnormal vestibular labyrinth "any structural abnormality in the portion of the membranous labyrinth concerned with the sense of equilibration (vs. the cochlear labyrinth, which is concerned with the sense of hearing) and innervated by the vestibular nerve; it is located within the semicircular canals and vestibule of the bony labyrinth, and consists of the utricle, saccule, and the semicircular, utriculosaccular, and endolymphatic ducts " [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0004718 abnormal vestibular nerve morphology "any structural abnormality in the part of the vestibulocochlear nerve [CN VIII] peripheral to the vestibular root; it is composed of the central processes of bipolar neurons that have the terminals of their peripheral processes on the hair cells in the ampullae of the semicircular ducts and the maculae of the saccule and utricle, and cell bodies of the vestibular ganglion" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0005170 cleft lip "defect in the upper lip where the maxillary prominence fails to merge with the merged medial nasal prominences" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Tbx10Dc/Tbx10Dc
Genetic Background: involves: C3H/HeJ

Allelic Composition: Tbx10Dc/Tbx10Dc
Genetic Background: DC/LeJ

 MP:0005191 head tilt "condition in which the portion of the body containing the brain and organs of sight, hearing, taste, and smell lists to the side" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0005307 head tossing "compulsive flailing of the head in multiple directions" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0006089 abnormal saccule morphology "malformation in the smaller of the two sacs in the vestibule" [smb:Susan M Bello, Mouse Genome Informatics Curator, Taber s Cyclopedic Medical Dictionary:19th edition: ISBN N 0-8036-0655-99, J:92940]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0006090 abnormal utricle morphology "malformation in the larger of the two sacs in the vestibule" [smb:Susan M Bello, Mouse Genome Informatics Curator, Taber s Cyclopedic Medical Dictionary:19th edition: ISBN N 0-8036-0655-99, J:92940]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0006409 vestibular ganglion hypoplasia "underdevelopment or reduced size, usually due to a reduced number of cell bodies, in the group of bipolar sensory nerve cell bodies concerned with equilibration that form a swelling on the vestibular part of the eighth cranial nerve in the fundus of the internal acoustic meatus" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0008488 abnormal semicircular canal ampulla morphology "any structural anomaly of the spherical enlargement at the base of each semicircular canal where they connect with the utricle, containing the crista ampullaris which detects movement of the fluid within the canals" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Abl1tm1Mlg/Abl1tm1Mlg
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0009265 delayed eyelid fusion "later than average time of the joining of the upper and lower thin folds of skin and muscle that cover the exposed portion of the eye" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Tbx10Dc/Tbx10Dc
Genetic Background: DC/LeJ

 MP:0009886 failure of palatal shelf elevation "the palatal shelves fail to move from a vertical position in the orofacial cavity to a horizontal apposition above the developing tongue" [PMID:16680722]
Show

Allelic Composition: Tbx10Dc/Tbx10Dc
Genetic Background: DC/LeJ

 MP:0009890 cleft secondary palate "congenital fissure of the tissues normally uniting to form the secondary palate" [PMID:16680722]
Show

Allelic Composition: Tbx10Dc/Tbx10Dc
Genetic Background: DC/LeJ

 MP:0011087 complete neonatal lethality "death of all organisms of a given genotype in a population within the neonatal period after birth (Mus: P0)" [MGI:csmith]
Show

Allelic Composition: Tbx10Dc/Tbx10Dc
Genetic Background: involves: C3H/HeJ

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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