ENSMUSG00000038624


Mus musculus

Features
Gene ID: ENSMUSG00000038624
  
Biological name :Nepn
  
Synonyms : Nephrocan / Nepn / Q9CQ76
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: B3
Gene start: 52388972
Gene end: 52404625
  
Corresponding Affymetrix probe sets: 10363132 (MoGene1.0st)   1419065_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000151395
Ensembl peptide - ENSMUSP00000070130
NCBI entrez gene - 66650     See in Manteia.
MGI - MGI:1913900
RefSeq - NM_025684
RefSeq - XM_006512818
RefSeq Peptide - NP_079960
swissprot - A0A1W2P6T1
swissprot - Q9CQ76
Ensembl - ENSMUSG00000038624
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-191d15.2ENSDARG00000092834Danio rerio
 ENSGALG00000014900Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Flrt2 / Q8BLU0 / Leucine-rich repeat transmembrane protein FLRT2 / O43155* / fibronectin leucine rich transmembrane protein 2*ENSMUSG0000004741420
Flrt1 / Q6RKD8 / Leucine-rich repeat transmembrane protein FLRT1 / Q9NZU1* / fibronectin leucine rich transmembrane protein 1*ENSMUSG0000004778720
Flrt3 / Q8BGT1 / Leucine-rich repeat transmembrane protein FLRT3 / Q9NZU0* / fibronectin leucine rich transmembrane protein 3*ENSMUSG0000005137920
Lrg1 / leucine rich alpha-2-glycoprotein 1 / P02750*ENSMUSG0000003709515
Gp1ba / O35930 / glycoprotein 1b, alpha polypeptide / P07359* / glycoprotein Ib platelet alpha subunit*ENSMUSG0000005067515
Omg / oligodendrocyte myelin glycoprotein / P23515*ENSMUSG0000004961213


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR025875  Leucine rich repeat 4
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0030198 extracellular matrix organization IDA
 biological_processGO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway IDA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005614 interstitial matrix IDA
 cellular_componentGO:0005615 extracellular space IDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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