ENSMUSG00000062028


Mus musculus

Features
Gene ID: ENSMUSG00000062028
  
Biological name :Irgc1
  
Synonyms : Irgc1 / Mus musculus immunity-related GTPase family, cinema 1 (Irgc1), transcript variant 1, mRNA.
  
Possible biological names infered from orthology : immunity related GTPase cinema / IRGC / Q6NXR0
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: A3
Gene start: 24431922
Gene end: 24452297
  
Corresponding Affymetrix probe sets: 10560856 (MoGene1.0st)   1440909_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000146207
Ensembl peptide - ENSMUSP00000104072
Ensembl peptide - ENSMUSP00000145975
NCBI entrez gene - 210145     See in Manteia.
MGI - MGI:2685948
RefSeq - XM_006539709
RefSeq - NM_001358033
RefSeq - NM_199013
RefSeq - XM_006539708
RefSeq Peptide - NP_001344962
RefSeq Peptide - NP_001344963
RefSeq Peptide - NP_950178
swissprot - D3Z720
swissprot - A0A0U1RQ16
Ensembl - ENSMUSG00000062028
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 irgq2ENSDARG00000068657Danio rerio
 IRGCENSG00000124449Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ifi47ENSMUSG0000007892031
Gm4841ENSMUSG0000006860630
Gm5431ENSMUSG0000005816329
Tgtp2 / Q3T9E4 / Q62293 / T-cell-specific guanine nucleotide triphosphate-binding protein 1 ENSMUSG0000007892129
Tgtp1 / Q3T9E4 / Q62293 / T-cell-specific guanine nucleotide triphosphate-binding protein 1 ENSMUSG0000007892229
9930111J21Rik1 / RIKEN cDNA 9930111J21 gene 1ENSMUSG0000006989329
9930111J21Rik2 / RIKEN cDNA 9930111J21 gene 2ENSMUSG0000006989228
Iigp1 / Q9QZ85 / Interferon-inducible GTPase 1 ENSMUSG0000005407228
F830016B08RikENSMUSG0000009094228
Gm12185ENSMUSG0000004885228
Gm4951ENSMUSG0000007355527
Igtp / IRGM* / A1A4Y4* / immunity related GTPase M*ENSMUSG0000007885325
Irgm1 / Q60766 / Mus musculus immunity-related GTPase family M member 1 (Irgm1), transcript variant 2, mRNA. / IRGM* / A1A4Y4* / immunity related GTPase M*ENSMUSG0000004687922
Irgm2 / IRGM* / A1A4Y4* / immunity related GTPase M*ENSMUSG0000006987422


Protein motifs (from Interpro)
Interpro ID Name
 IPR007743  Immunity-related GTPases-like
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030385  IRG-type guanine nucleotide-binding (G) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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