ENSMUSG00000078920


Mus musculus

Features
Gene ID: ENSMUSG00000078920
  
Biological name :Ifi47
  
Synonyms : Ifi47
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B1.2
Gene start: 49076587
Gene end: 49096974
  
Corresponding Affymetrix probe sets: 10375515 (MoGene1.0st)   1417292_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000150066
Ensembl peptide - ENSMUSP00000150940
Ensembl peptide - ENSMUSP00000041975
Ensembl peptide - ENSMUSP00000104825
Ensembl peptide - ENSMUSP00000149108
NCBI entrez gene - 15953     See in Manteia.
MGI - MGI:99448
RefSeq - NM_001271676
RefSeq - NM_001271677
RefSeq - NM_008330
RefSeq Peptide - NP_001258606
RefSeq Peptide - NP_032356
RefSeq Peptide - NP_001258605
swissprot - Q61635
swissprot - A0A1L1SQM2
swissprot - A0A1L1SSW0
Ensembl - ENSMUSG00000078920
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 irgq2ENSDARG00000068657Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm5431ENSMUSG0000005816342
9930111J21Rik1 / RIKEN cDNA 9930111J21 gene 1ENSMUSG0000006989342
Gm12185ENSMUSG0000004885242
Tgtp1 / Q3T9E4 / Q62293 / T-cell-specific guanine nucleotide triphosphate-binding protein 1 ENSMUSG0000007892239
Tgtp2 / Q3T9E4 / Q62293 / T-cell-specific guanine nucleotide triphosphate-binding protein 1 ENSMUSG0000007892139
Gm4951ENSMUSG0000007355537
Iigp1 / Q9QZ85 / Interferon-inducible GTPase 1 ENSMUSG0000005407237
Gm4841ENSMUSG0000006860635
9930111J21Rik2 / RIKEN cDNA 9930111J21 gene 2ENSMUSG0000006989235
F830016B08RikENSMUSG0000009094235
Irgc1 / Mus musculus immunity-related GTPase family, cinema 1 (Irgc1), transcript variant 1, mRNA. / IRGC* / Q6NXR0* / immunity related GTPase cinema*ENSMUSG0000006202834
Irgm1 / Q60766 / Mus musculus immunity-related GTPase family M member 1 (Irgm1), transcript variant 2, mRNA. / IRGM* / A1A4Y4* / immunity related GTPase M*ENSMUSG0000004687928
Igtp / IRGM* / A1A4Y4* / immunity related GTPase M*ENSMUSG0000007885327
Irgm2 / IRGM* / A1A4Y4* / immunity related GTPase M*ENSMUSG0000006987426


Protein motifs (from Interpro)
Interpro ID Name
 IPR007743  Immunity-related GTPases-like
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030385  IRG-type guanine nucleotide-binding (G) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006952 defense response IMP
 biological_processGO:0035458 cellular response to interferon-beta IBA
 cellular_componentGO:0005783 endoplasmic reticulum TAS
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003924 GTPase activity IBA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005027 increased susceptibility to parasitic infection "greater likelihood that an organism will develop ill effects from a parasitic infection or from components of or toxins produced by parasites " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Cntnap1tm1Pele/Cntnap1tm1Pele
Genetic Background: Not Specified

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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