Manteia

ENSMUSG00000067441

Mus musculus

Features

Gene ID:	ENSMUSG00000067441

Biological name :	H2afb1

Synonyms :	H2afb1

Possible biological names infered from orthology :	H2AFB2 / H2AFB3 / H2A histone family member B1 / H2A histone family member B2 / H2A histone family member B3 / P0C5Y9 / P0C5Z0

Species:	Mus musculus

Chr. number:	X
Strand:	1
Band:	E1
Gene start:	117014757
Gene end:	117015104

Corresponding Affymetrix probe sets:	10601553 (MoGene1.0st) 10606552 (MoGene1.0st)

Cross references:	Ensembl peptide - ENSMUSP00000138181 NCBI entrez gene - 100039319 See in Manteia. MGI - MGI:3642445 RefSeq - NM_001102665 RefSeq Peptide - NP_001096135 swissprot - S4R1E0 Ensembl - ENSMUSG00000067441

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
H2afb3 / H2AFB2* / P0C5Z0* / H2AFB1* / P0C5Y9* / H2A histone family member B3* / H2A histone family member B1* / H2A histone family member B2*	ENSMUSG00000083616	97
H2afb2 / H2AFB3* / P0C5Z0* / H2AFB1* / P0C5Y9* / H2A histone family member B3* / H2A histone family member B1* / H2A histone family member B2*	ENSMUSG00000082482	82
Q64522 / Hist2h2ab / Histone H2A type 2-B / Q8IUE6* / histone cluster 2 H2A family member b*	ENSMUSG00000063689	37
Hist1h2aa / histone cluster 1, H2aa / Q96QV6* / histone cluster 1 H2A family member a*	ENSMUSG00000060081	37
H2afj / Q8R1M2 / Histone H2A.J / Q9BTM1* / H2A histone family member J*	ENSMUSG00000060032	37
H2afx / P27661 / Histone H2AX / P16104* / H2A histone family member X*	ENSMUSG00000049932	37
Q64523 / Hist2h2ac / Histone H2A type 2-C	ENSMUSG00000068855	36
Q6GSS7 / Hist2h2aa2 / Histone H2A type 2-A	ENSMUSG00000063954	36
Q6GSS7 / Hist2h2aa1 / Histone H2A type 2-A / Q16777* / Q6FI13* / HIST2H2AC* / HIST2H2AA4* / histone cluster 2 H2A family member c* / histone cluster 2 H2A family member a4*	ENSMUSG00000064220	36
Q8BFU2 / Hist3h2a / Histone H2A type 3 / Q7L7L0* / histone cluster 3 H2A*	ENSMUSG00000078851	36
Q8CGP5 / Hist1h2af / Histone H2A type 1-F	ENSMUSG00000061991	35
Q8CGP7 / Hist1h2ak / Histone H2A type 1-K	ENSMUSG00000063021	35
H2afy / Q9QZQ8 / Core histone macro-H2A.1 / O75367* / H2A histone family member Y*	ENSMUSG00000015937	30
H2afy2 / Q8CCK0 / Core histone macro-H2A.2 / Q9P0M6* / H2A histone family member Y2*	ENSMUSG00000020086	30

Protein motifs (from Interpro)

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006342	chromatin silencing	IBA
cellular_component	GO:0000786	nucleosome	IEA
cellular_component	GO:0000788	nuclear nucleosome	ISO
cellular_component	GO:0000790	nuclear chromatin	IBA
cellular_component	GO:0005634	nucleus	IEA
cellular_component	GO:0005694	chromosome	IEA
cellular_component	GO:0035327	transcriptionally active chromatin	ISO
molecular_function	GO:0003677	DNA binding	IBA
molecular_function	GO:0046982	protein heterodimerization activity	IEA

Pathways (from Reactome)

Pathway description

Packaging Of Telomere Ends

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr