ENSMUSG00000070425


Mus musculus

Features
Gene ID: ENSMUSG00000070425
  
Biological name :Xntrpc
  
Synonyms : Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough / Xntrpc
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: E2
Gene start: 102065713
Gene end: 102096864
  
Corresponding Affymetrix probe sets: 10555620 (MoGene1.0st)   1425672_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000121068
Ensembl peptide - ENSMUSP00000081903
Ensembl peptide - ENSMUSP00000122430
Ensembl peptide - ENSMUSP00000123466
NCBI entrez gene - 102443351     See in Manteia.
MGI - MGI:5546370
RefSeq - NM_011644
RefSeq Peptide - NP_035774
swissprot - F8VQM8
swissprot - F7D6D1
swissprot - F6WIA6
swissprot - E9PVR2
Ensembl - ENSMUSG00000070425
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trpc2aENSDARG00000039065Danio rerio
 trpc2bENSDARG00000003344Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Trpc2 / Q9R244 / Short transient receptor potential channel 2 ENSMUSG0000010025470
Trpc6 / Q61143 / transient receptor potential cation channel, subfamily C, member 6 / Q9Y210*ENSMUSG0000003199724
Trpc3 / transient receptor potential cation channel, subfamily C, member 3 / Q13507*ENSMUSG0000002771624
Trpc7 / Q9WVC5 / transient receptor potential cation channel, subfamily C, member 7 / Q9HCX4*ENSMUSG0000002154123
Trpc4 / Q9QUQ5 / transient receptor potential cation channel, subfamily C, member 4 / Q9UBN4*ENSMUSG0000002774822
Trpc5 / Q9QX29 / transient receptor potential cation channel, subfamily C, member 5 / Q9UL62*ENSMUSG0000004171022
Trpc1 / transient receptor potential cation channel, subfamily C, member 1 / P48995*ENSMUSG0000003283919


Protein motifs (from Interpro)
Interpro ID Name
 IPR002153  Transient receptor potential channel, canonical
 IPR002706  DNA-repair protein Xrcc1, N-terminal
 IPR005458  Transient receptor potential channel, canonical 2
 IPR005821  Ion transport domain
 IPR008979  Galactose-binding-like domain superfamily
 IPR013555  Transient receptor ion channel domain
 IPR020683  Ankyrin repeat-containing domain
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000012 single strand break repair IEA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003684 damaged DNA binding IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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