ENSDARG00000001712


Danio rerio

Features
Gene ID: ENSDARG00000001712
  
Biological name :si:ch211-247n2.1
  
Synonyms : si:ch211-247n2.1
  
Possible biological names infered from orthology : AC117457.1 / Calcium-activated potassium channel subunit beta-2 / KCNMB1 / KCNMB2 / potassium calcium-activated channel subfamily M regulatory beta subunit 1 / potassium calcium-activated channel subfamily M regulatory beta subunit 2 / Q16558 / Q9CZM9 / Q9Y691
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 8303941
Gene end: 8350945
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000052697
Ensembl peptide - ENSDARP00000129916
NCBI entrez gene - 796753     See in Manteia.
swissprot - E7FCW4
ZFIN ID - ZDB-GENE-141216-101
Ensembl - ENSDARG00000001712
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000031929Gallus gallus
 KCNMB1ENSGALG00000002118Gallus gallus
 AC117457.1ENSG00000275163Homo sapiens
 KCNMB1ENSG00000145936Homo sapiens
 KCNMB2ENSG00000197584Homo sapiens
 Kcnmb1ENSMUSG00000020155Mus musculus
 Kcnmb2ENSMUSG00000037610Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kcnmb2 / potassium large conductance calcium-activated channel, subfamily M, beta member 2 / Q16558* / KCNMB1* / Q9Y691* / Q9CZM9* / AC117457.1* / Calcium-activated potassium channel subuni...ENSDARG0000000656850
si:ch211-38m6.7 / KCNMB3* / Q9NPA1* / potassium calcium-activated channel subfamily M regulatory beta subunit 3*ENSDARG0000006312925


Protein motifs (from Interpro)
Interpro ID Name
 IPR000859  CUB domain
 IPR003930  Potassium channel, calcium-activated, BK, beta subunit
 IPR015382  KCNMB2, ball/chain domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005513 detection of calcium ion IBA
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0007268 chemical synaptic transmission IBA
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:0071805 potassium ion transmembrane transport IBA
 cellular_componentGO:0008076 voltage-gated potassium channel complex IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015269 calcium-activated potassium channel activity IBA
 molecular_functionGO:0015459 potassium channel regulator activity IBA


Pathways (from Reactome)
Pathway description
Ca2+ activated K+ channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000001712 si:ch211-247n2.1 / KCNMB2* / Q9Y691* / Q9CZM9* / KCNMB1* / Q16558* / AC117457.1* / Calcium-activated potassium channel subunit beta-2 * / potassium calcium-activated channel subfamily M reg...  / complex
 ENSDARG00000063129 si:ch211-38m6.7 / KCNMB3* / Q9NPA1* / potassium calcium-activated channel subfamily M regulatory beta subunit 3*  / complex
 ENSDARG00000079840 kcnma1a / potassium large conductance calcium-activated channel, subfamily M, alpha member 1a / KCNMA1* / Q12791* / potassium calcium-activated channel subfamily M alpha 1* / potassium larg...  / complex






 

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