ENSDARG00000001859


Danio rerio

Features
Gene ID: ENSDARG00000001859
  
Biological name :dbx1b
  
Synonyms : dbx1b / developing brain homeobox 1b
  
Possible biological names infered from orthology : A6NMT0 / DBX1 / developing brain homeobox 1 / Homeobox protein DBX1 / P52950
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 14507567
Gene end: 14510482
  
Corresponding Affymetrix probe sets: Dr.8072.1.S1_at (Zebrafish Array)   NM_131178_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000013350
NCBI entrez gene - 30416     See in Manteia.
RefSeq - NM_131178
RefSeq Peptide - NP_571253
swissprot - F1R7K8
ZFIN ID - ZDB-GENE-000128-11
Ensembl - ENSDARG00000001859
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DBX1ENSGALG00000003965Gallus gallus
 DBX1ENSG00000109851Homo sapiens
 Dbx1ENSMUSG00000030507Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dbx1a / Q9PTU1 / developing brain homeobox 1a / DBX1* / A6NMT0* / P52950* / Homeobox protein DBX1 * / developing brain homeobox 1*ENSDARG0000008639361
hlx1 / H2.0-like homeo box 1 (Drosophila) / HLX* / Q14774* / Q61670* / H2.0 like homeobox* / H2.0-like homeobox protein *ENSDARG0000000913425
nkx6.1 / NK6 homeobox 1 / P78426* / Q99MA9* / Homeobox protein Nkx-6.1 *ENSDARG0000002256918
tlx3b / T cell leukemia homeobox 3bENSDARG0000001761517
barhl1a / BarH-like homeobox 1a / Q9BZE3* / P63157* / BARHL1* / BarH like homeobox 1* / BarH-like 1 homeobox protein *ENSDARG0000003550817
barx1 / BARX homeobox 1 / Q9ER42* / Q9HBU1* / Homeobox protein BarH-like 1 *ENSDARG0000000740716
tlx2 / T cell leukemia homeobox 2 / TLX1* / P31314* / T cell leukemia homeobox 1*ENSDARG0000001127316
barhl1b / BarH-like homeobox 1b / Q9BZE3* / P63157* / BARHL1* / BarH like homeobox 1* / BarH-like 1 homeobox protein *ENSDARG0000001901316
barx2 / BARX homeobox 2 / O08686* / Q9UMQ3* / Homeobox protein BarH-like 2 *ENSDARG0000004109816
bsx / Q6R3Q6 / brain-specific homeobox / Q3C1V8* / Q810B3* / Brain-specific homeobox protein homolog *ENSDARG0000006897616
nkx6.2 / NK6 homeobox 2 / Q9C056*ENSDARG0000010473516
lbx1a / ladybird homeobox 1a / LBX1* / P52954* / P52955* / ladybird homeobox 1* / Transcription factor LBX1 *ENSDARG0000001832115
lbx2 / ladybird homeobox 2ENSDARG0000002513115
HHEX / hematopoietically expressed homeobox / Q03014*ENSDARG0000009823115
barhl2 / BarH-like homeobox 2 / Q8VIB5* / Q9NY43* / BarH-like 2 homeobox protein *ENSDARG0000010436115
tlx1 / T cell leukemia homeobox 1 / P31314*ENSDARG0000000396514
lbx1b / ladybird homeobox 1b / LBX1* / P52954* / P52955* / ladybird homeobox 1* / Transcription factor LBX1 *ENSDARG0000001861114
nkx6.3 / NK6 homeobox 3 / A6NJ46* / Q3UHX8* / Homeobox protein Nkx-6.3 *ENSDARG0000006052914


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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