ENSDARG00000068288


Danio rerio

Features
Gene ID: ENSDARG00000068288
  
Biological name :lamc2
  
Synonyms : lamc2 / laminin, gamma 2
  
Possible biological names infered from orthology : laminin subunit gamma 2 / Q13753
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 35991137
Gene end: 36021608
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134080
Ensembl peptide - ENSDARP00000136055
Ensembl peptide - ENSDARP00000141348
Ensembl peptide - ENSDARP00000089477
swissprot - A0A0R4IK75
swissprot - A0A0R4IL05
swissprot - A0A0R4IVT4
swissprot - F1QIJ3
ZFIN ID - ZDB-GENE-110222-3
Ensembl - ENSDARG00000068288
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LAMC2ENSG00000058085Homo sapiens
 Lamc2ENSMUSG00000026479Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lamc1 / Q1LVF0 / laminin, gamma 1 / P11047* / laminin subunit gamma 1*ENSDARG0000003627923
lama5 / laminin, alpha 5 / O15230* / Q61001* / laminin subunit alpha 5*ENSDARG0000005854317
lama1 / laminin, alpha 1 / P25391* / laminin subunit alpha 1*ENSDARG0000010227716
lamb2 / laminin, beta 2 (laminin S) / P55268* / Q61292* / laminin subunit beta 2*ENSDARG0000000208415
lamb1b / laminin, beta 1b / LAMB1* / P02469* / P07942* / laminin subunit beta 1*ENSDARG0000004552415
lama3 / laminin, alpha 3 / Q16787* / Q61789* / laminin subunit alpha 3* / Mus musculus laminin, alpha 3 (Lama3), transcript variant 2, mRNA.*ENSDARG0000007146214
lamc3 / laminin, gamma 3 / Q9R0B6* / Q9Y6N6* / laminin subunit gamma 3*ENSDARG0000009357214
lamb1a / laminin, beta 1a / LAMB1* / P02469* / P07942* / laminin subunit beta 1*ENSDARG0000010120914
lama4 / laminin, alpha 4 / P97927* / Q16363* / laminin subunit alpha 4*ENSDARG0000002078513
lamb2l / laminin, beta 2-likeENSDARG0000003395013
lamb4 / laminin, beta 4 / A4D0S4* / laminin subunit beta 4*ENSDARG0000003913312
si:ch211-241e1.3 / LAMA3* / Q16787* / Q61789* / laminin subunit alpha 3* / Mus musculus laminin, alpha 3 (Lama3), transcript variant 2, mRNA.*ENSDARG0000002261511
si:dkey-202e22.2ENSDARG000000612605
lama2 / laminin, alpha 2 / P24043* / laminin subunit alpha 2*ENSDARG000000993904
ntn4 / netrin 4 / Q9HB63* / Q9JI33*ENSDARG000001020664
CABZ01092781.1 / LAMB3* / Q13751* / laminin subunit beta 3*ENSDARG000001100403
CABZ01065423.1 / LAMA2* / P24043* / laminin subunit alpha 2*ENSDARG000001120193


Protein motifs (from Interpro)
Interpro ID Name
 IPR000034  Laminin IV
 IPR002049  Laminin EGF domain
 IPR031082  Laminin subunit gamma-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048731 system development IEA
 biological_processGO:0070831 basement membrane assembly IEA
 cellular_componentGO:0005604 basement membrane IEA


Pathways (from Reactome)
Pathway description
Degradation of the extracellular matrix
Assembly of collagen fibrils and other multimeric structures
Anchoring fibril formation
Laminin interactions
Type I hemidesmosome assembly
MET activates PTK2 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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