ENSDARG00000102066


Danio rerio

Features
Gene ID: ENSDARG00000102066
  
Biological name :ntn4
  
Synonyms : netrin 4 / ntn4
  
Possible biological names infered from orthology : Q9HB63 / Q9JI33
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 19334314
Gene end: 19369002
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132076
Ensembl peptide - ENSDARP00000142987
NCBI entrez gene - 561440     See in Manteia.
swissprot - A0A0R4IFE9
swissprot - A0A1D5NT15
ZFIN ID - ZDB-GENE-050310-1
Ensembl - ENSDARG00000102066
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NTN4ENSGALG00000011406Gallus gallus
 NTN4ENSG00000074527Homo sapiens
 Ntn4ENSMUSG00000020019Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-202e22.2ENSDARG0000006126042
lamb2 / laminin, beta 2 (laminin S) / P55268* / Q61292* / laminin subunit beta 2*ENSDARG0000000208429
lamb2l / laminin, beta 2-likeENSDARG0000003395029
lamb1b / laminin, beta 1b / LAMB1* / P02469* / P07942* / laminin subunit beta 1*ENSDARG0000004552429
lamb1a / laminin, beta 1a / LAMB1* / P02469* / P07942* / laminin subunit beta 1*ENSDARG0000010120929
lamb4 / laminin, beta 4 / A4D0S4* / laminin subunit beta 4*ENSDARG0000003913328
lama5 / laminin, alpha 5 / O15230* / Q61001* / laminin subunit alpha 5*ENSDARG0000005854323
lama1 / laminin, alpha 1 / P25391* / laminin subunit alpha 1*ENSDARG0000010227722
lamc3 / laminin, gamma 3 / Q9R0B6* / Q9Y6N6* / laminin subunit gamma 3*ENSDARG0000009357221
lamc1 / Q1LVF0 / laminin, gamma 1 / P11047* / laminin subunit gamma 1*ENSDARG0000003627920
CABZ01065423.1 / LAMA2* / P24043* / laminin subunit alpha 2*ENSDARG0000011201916
lama4 / laminin, alpha 4 / P97927* / Q16363* / laminin subunit alpha 4*ENSDARG000000207859
si:ch211-241e1.3 / LAMA3* / Q16787* / Q61789* / laminin subunit alpha 3* / Mus musculus laminin, alpha 3 (Lama3), transcript variant 2, mRNA.*ENSDARG000000226156
lama3 / laminin, alpha 3 / Q16787* / Q61789* / laminin subunit alpha 3* / Mus musculus laminin, alpha 3 (Lama3), transcript variant 2, mRNA.*ENSDARG000000714626
lamc2 / laminin, gamma 2 / Q13753* / laminin subunit gamma 2*ENSDARG000000682885
lama2 / laminin, alpha 2 / P24043* / laminin subunit alpha 2*ENSDARG000000993904
CABZ01092781.1 / LAMB3* / Q13751* / laminin subunit beta 3*ENSDARG000001100401


Protein motifs (from Interpro)
Interpro ID Name
 IPR001134  Netrin domain
 IPR002049  Laminin EGF domain
 IPR008211  Laminin, N-terminal
 IPR008979  Galactose-binding-like domain superfamily
 IPR008993  Tissue inhibitor of metalloproteinases-like, OB-fold
 IPR018933  Netrin module, non-TIMP type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048514 blood vessel morphogenesis IMP
 cellular_componentGO:0005576 extracellular region IEA


Pathways (from Reactome)
Pathway description
Netrin-1 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000014 dorsal aorta dorsal aorta broken , abnormal
Show

 ZFA:0000477 posterior cardinal vein posterior cardinal vein broken , abnormal
Show

 ZFA:0001267 cranial vasculature cranial vasculature physical object quality , abnormal
Show

 ZFA:0001285 intersegmental vessel intersegmental vessel decreased length , abnormal
intersegmental vessel decreased thickness , abnormal
intersegmental vessel decreased amount , abnormal
Show

 ZFA:0005004 aortic arch aortic arch physical object quality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000099034 unc5a / unc-5 netrin receptor A / Q6ZN44* / Q8K1S4*  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr