ENSDARG00000111860


Danio rerio

Features
Gene ID: ENSDARG00000111860
  
Biological name :RHO (1 of many)
  
Synonyms : RHO (1 of many) / rhodopsin
  
Possible biological names infered from orthology : P08100 / P15409 / RHO
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 54302700
Gene end: 54304381
  
Corresponding Affymetrix probe sets: Dr.8099.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000153318
Ensembl - ENSDARG00000111860
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RHOENSGALG00000020745Gallus gallus
 RHOENSG00000163914Homo sapiens
 RhoENSMUSG00000030324Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rho / P35359 / rhodopsin / P08100*ENSDARG0000000219373
rhol / rhodopsin, like / RHO* / P15409* / P08100* / rhodopsin*ENSDARG0000007066671
Q9W6A6 / opn1mw4 / opsin 1 (cone pigments), medium-wave-sensitive, 4ENSDARG0000000063866
Q8AYM7 / opn1mw3 / opsin 1 (cone pigments), medium-wave-sensitive, 3ENSDARG0000004427966
opn1mw2 / opsin 1 (cone pigments), medium-wave-sensitive, 2ENSDARG0000004428063
Q9W6A5 / opn1mw1 / opsin 1 (cone pigments), medium-wave-sensitive, 1ENSDARG0000009700862
Q8AYN0 / opn1lw2 / opsin 1 (cone pigments), long-wave-sensitive, 2 / OPN1MW* / P04000* / P0DN77* / O35599* / P0DN78* / P04001* / OPN1LW* / OPN1MW3* / OPN1MW2* / opsin 1, long wave sensitive...ENSDARG0000004486144
Q9W6A7 / opn1lw1 / opsin 1 (cone pigments), long-wave-sensitive, 1 / OPN1MW* / P04000* / P0DN77* / O35599* / P0DN78* / P04001* / OPN1LW* / OPN1MW3* / OPN1MW2* / opsin 1, long wave sensitive...ENSDARG0000004486244
Q9W6A8 / opn1sw2 / opsin 1 (cone pigments), short-wave-sensitive 2ENSDARG0000001727443
opn1sw1 / opsin 1 (cone pigments), short-wave-sensitive 1 / P51491* / OPN1SW* / P03999* / Short-wave-sensitive opsin 1 * / opsin 1, short wave sensitive*ENSDARG0000004567743
parapinopsina / parapinopsin aENSDARG0000011697640
valopa / vertebrate ancient long opsin aENSDARG0000002115036
valopb / vertebrate ancient long opsin bENSDARG0000005418134
parapinopsinb / parapinopsin bENSDARG0000004467233
tmtops3a / teleost multiple tissue opsin 3aENSDARG0000003646032
opn3 / opsin 3 / Q9H1Y3* / Q9WUK7*ENSDARG0000005277531
tmtops3b / teleost multiple tissue opsin 3bENSDARG0000009062928
opn7a / opsin 7, group member aENSDARG0000002420826
parietopsinENSDARG0000005205626
tmtops2b / teleost multiple tissue opsin 2bENSDARG0000002782225


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR000732  Rhodopsin
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR027430  Visual pigments (opsins) retinal binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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