ENSGALG00000001073


Gallus gallus

Features
Gene ID: ENSGALG00000001073
  
Biological name :NR6A1
  
Synonyms : NR6A1 / nuclear receptor subfamily 6 group A member 1
  
Possible biological names infered from orthology : Q15406 / Q64249
  
Species: Gallus gallus
  
Chr. number: 17
Strand: -1
Band:
Gene start: 9939863
Gene end: 9999037
  
Corresponding Affymetrix probe sets: Gga.2700.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001605
Ensembl peptide - ENSGALP00000050534
Ensembl peptide - ENSGALP00000044482
NCBI entrez gene - 772325     See in Manteia.
RefSeq - XM_001235477
RefSeq - XM_015279582
RefSeq - XM_015279583
RefSeq - XM_015279584
swissprot - A0A1D5NVV3
swissprot - F1NVM8
swissprot - A0A1D5PCP4
Ensembl - ENSGALG00000001073
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nr6a1aENSDARG00000101508Danio rerio
 NR6A1ENSG00000148200Homo sapiens
 Nr6a1ENSMUSG00000063972Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NR1D2 / nuclear receptor subfamily 1 group D member 2 / Q14995* / Q60674*ENSGALG0000001129124
NR5A2 / nuclear receptor subfamily 5 group A member 2 / O00482* / P45448*ENSGALG0000000218223
ENSGALG0000000103520
NR5A1 / steroidogenic factor 1 / P33242* / Q13285* / nuclear receptor subfamily 5 group A member 1*ENSGALG0000000108020
RORA / nuclear receptor ROR-alpha / P51448* / P35398* / RAR related orphan receptor A* / RAR-related orphan receptor alpha*ENSGALG0000000375919
RORC / RAR related orphan receptor C / P51449* / P51450* / Nuclear receptor ROR-gamma *ENSGALG0000003394119
PPARA / peroxisome proliferator-activated receptor alpha / P23204* / Q07869*ENSGALG0000004147019
PPARD / peroxisome proliferator-activated receptor delta / P35396* / Q03181*ENSGALG0000000258818
PPARG / peroxisome proliferator activated receptor gamma / P37231*ENSGALG0000000497418
RORB / RAR related orphan receptor B / Q8R1B8* / Q92753* / Nuclear receptor ROR-beta *ENSGALG0000001515018


Protein motifs (from Interpro)
Interpro ID Name
 IPR000536  Nuclear hormone receptor, ligand-binding domain
 IPR001628  Zinc finger, nuclear hormone receptor-type
 IPR001723  Nuclear hormone receptor
 IPR013088  Zinc finger, NHR/GATA-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007276 gamete generation IEA
 biological_processGO:0030518 intracellular steroid hormone receptor signaling pathway IBA
 biological_processGO:0043401 steroid hormone mediated signaling pathway IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0004879 nuclear receptor activity IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Nuclear Receptor transcription pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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