ENSGALG00000037360


Gallus gallus

Features
Gene ID: ENSGALG00000037360
  
Biological name :DDX17
  
Synonyms : DDX17 / DEAD-box helicase 17
  
Possible biological names infered from orthology : Probable ATP-dependent RNA helicase DDX17 / Q501J6 / Q92841
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 50911713
Gene end: 50928816
  
Corresponding Affymetrix probe sets: Gga.4892.1.S1_at (Chicken Array)   GgaAffx.23838.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050673
Ensembl peptide - ENSGALP00000060388
NCBI entrez gene - 418024     See in Manteia.
RefSeq - XM_416260
swissprot - A0A1D5PD32
swissprot - A0A1L1RNN7
Ensembl - ENSGALG00000037360
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-156n14.5ENSDARG00000010873Danio rerio
 DDX17ENSG00000100201Homo sapiens
 Ddx17ENSMUSG00000055065Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DDX5 / DEAD-box helicase 5 / P17844* / Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5), transcript variant 3, mRNA.*ENSGALG0000000353262
DDX42 / ATP-dependent RNA helicase DDX42 / Q810A7* / Q86XP3* / DEAD-box helicase 42*ENSGALG0000000058135
DDX53* / DDX43* / Q86TM3* / Q9NXZ2* / DEAD-box helicase 53* / DEAD-box helicase 43*ENSGALG0000001592832


Protein motifs (from Interpro)
Interpro ID Name
 IPR000629  ATP-dependent RNA helicase DEAD-box, conserved site
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
SUMOylation of transcription cofactors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000008435 SUMO1 / Q8QGH2 / Small ubiquitin-related modifier 1 / P63166* / P63165* / small ubiquitin-like modifier 1*  / reaction / complex
 ENSGALG00000006428 UBE2I / P63283 / SUMO-conjugating enzyme UBC9 / P63280* / P63279* / ubiquitin conjugating enzyme E2 I*  / reaction






 

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