ENSMUSG00000095241


Mus musculus
filamentkeratinGm5478intermediatetypeiiproteinheadstructuralmoleculeactivitykeratinizationformationcornifiedenvelope

Features
Gene ID: ENSMUSG00000095241
  
Biological name :Gm5478
  
Synonyms : Gm5478
  
Possible biological names infered from orthology : keratin 6A / keratin 6B / keratin 6C / KRT6A / KRT6B / KRT6C / P02538 / P04259 / P48668
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: F2
Gene start: 101643020
Gene end: 101647380
  
Corresponding Affymetrix probe sets: 10432767 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000097759
Ensembl peptide - ENSMUSP00000155269
MGI - MGI:3646318
swissprot - D3Z6R0
Ensembl - ENSMUSG00000095241
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 krt4ENSDARG00000017624Danio rerio
 krt5ENSDARG00000058371Danio rerio
 krt8ENSDARG00000058358Danio rerio
 zgc:158846ENSDARG00000058462Danio rerio
 KRT6AENSG00000205420Homo sapiens
 KRT6BENSG00000185479Homo sapiens
 KRT6CENSG00000170465Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Krt6b / keratin 6B / KRT6A* / KRT6C* / P02538* / P04259* / P48668* / keratin 6A* / keratin 6C*ENSMUSG0000002304175
Krt6a / P50446 / Keratin, type II cytoskeletal 6A / KRT6B* / KRT6C* / P04259* / P48668* / P02538* / keratin 6A* / keratin 6B* / keratin 6C*ENSMUSG0000005835474
Krt5 / Q922U2 / keratin 5 / P13647*ENSMUSG0000006152764
Gm5414 / KRT6A* / KRT6B* / KRT6C* / P04259* / P48668* / P02538* / keratin 6A* / keratin 6B* / keratin 6C*ENSMUSG0000006423262
Krt75 / Q8BGZ7 / Keratin, type II cytoskeletal 75 / O95678* / keratin 75*ENSMUSG0000002298661
Krt90ENSMUSG0000004869953
Krt4 / P07744 / Keratin, type II cytoskeletal 4 / P19013* / keratin 4*ENSMUSG0000005966853
Krt79 / Q8VED5 / Keratin, type II cytoskeletal 79 / Q5XKE5* / keratin 79*ENSMUSG0000006139753
Krt76 / Q3UV17 / Keratin, type II cytoskeletal 2 oral / Q01546* / keratin 76*ENSMUSG0000007540253
Krt7 / Q9DCV7 / Keratin, type II cytoskeletal 7 / P08729* / keratin 7*ENSMUSG0000002303948
Krt8 / P11679 / Keratin, type II cytoskeletal 8 / P05787* / keratin 8*ENSMUSG0000004938245


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR003054  Keratin, type II
 IPR032444  Keratin type II head


Gene Ontology (GO)
cellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellorganellesupramolecular complexcellcellorganelleorganellesupramolecular complexsupramolecular complex
TypeGO IDTermEv.Code
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0045095 keratin filament IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
Keratinization
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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