ENSDARG00000002656


Danio rerio

Features
Gene ID: ENSDARG00000002656
  
Biological name :stxbp5a
  
Synonyms : stxbp5a / syntaxin binding protein 5a (tomosyn)
  
Possible biological names infered from orthology : Q5T5C0 / Q8K400 / STXBP5 / syntaxin binding protein 5
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 31745949
Gene end: 31905968
  
Corresponding Affymetrix probe sets: Dr.13085.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000114105
Ensembl peptide - ENSDARP00000119109
Ensembl peptide - ENSDARP00000114325
NCBI entrez gene - 556789     See in Manteia.
swissprot - A5WW52
swissprot - A5PN18
swissprot - Q5RGD1
ZFIN ID - ZDB-GENE-041001-161
Ensembl - ENSDARG00000002656
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STXBP5ENSGALG00000012336Gallus gallus
 Q5T5C0ENSG00000164506Homo sapiens
 Q8K400ENSMUSG00000019790Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stxbp5b / syntaxin binding protein 5b (tomosyn) / Q5T5C0* / STXBP5* / syntaxin binding protein 5*ENSDARG0000002923480
Q5SQE2 / stxbp5l / syntaxin binding protein 5-like / Q5DQR4* / Q9Y2K9*ENSDARG0000000638365
llgl2 / Q7SZE3 / lethal giant larvae homolog 2 (Drosophila) / Q3TJ91* / Q6P1M3* / Lethal(2) giant larvae protein homolog 2 * / LLGL2, scribble cell polarity complex component*ENSDARG0000002392026
llgl1 / lethal giant larvae homolog 1 (Drosophila) / Q15334* / Q80Y17* / Lethal(2) giant larvae protein homolog 1 * / LLGL1, scribble cell polarity complex component*ENSDARG000000096939


Protein motifs (from Interpro)
Interpro ID Name
 IPR000664  Lethal(2) giant larvae protein
 IPR001388  Synaptobrevin
 IPR001680  WD40 repeat
 IPR013577  Lethal giant larvae homologue 2
 IPR013905  Lethal giant larvae (Lgl)-like, C-terminal domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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