ENSDARG00000006383


Danio rerio

Features
Gene ID: ENSDARG00000006383
  
Biological name :stxbp5l
  
Synonyms : Q5SQE2 / stxbp5l / syntaxin binding protein 5-like
  
Possible biological names infered from orthology : Q5DQR4 / Q9Y2K9
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 27415754
Gene end: 27649406
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000147177
Ensembl peptide - ENSDARP00000153693
Ensembl peptide - ENSDARP00000027152
Ensembl peptide - ENSDARP00000117512
NCBI entrez gene - 567605     See in Manteia.
swissprot - B0S761
swissprot - Q5SQE2
ZFIN ID - ZDB-GENE-041210-220
Ensembl - ENSDARG00000006383
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STXBP5LENSGALG00000032361Gallus gallus
 Q9Y2K9ENSG00000145087Homo sapiens
 Q5DQR4ENSMUSG00000022829Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stxbp5a / syntaxin binding protein 5a (tomosyn) / STXBP5* / Q5T5C0* / Q8K400* / syntaxin binding protein 5*ENSDARG0000000265663
stxbp5b / syntaxin binding protein 5b (tomosyn) / Q5T5C0* / STXBP5* / syntaxin binding protein 5*ENSDARG0000002923461
llgl2 / Q7SZE3 / lethal giant larvae homolog 2 (Drosophila) / Q3TJ91* / Q6P1M3* / Lethal(2) giant larvae protein homolog 2 * / LLGL2, scribble cell polarity complex component*ENSDARG0000002392024
llgl1 / lethal giant larvae homolog 1 (Drosophila) / Q15334* / Q80Y17* / Lethal(2) giant larvae protein homolog 1 * / LLGL1, scribble cell polarity complex component*ENSDARG000000096938


Protein motifs (from Interpro)
Interpro ID Name
 IPR000664  Lethal(2) giant larvae protein
 IPR001388  Synaptobrevin
 IPR001680  WD40 repeat
 IPR013577  Lethal giant larvae homologue 2
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0017157 regulation of exocytosis IBA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0050708 regulation of protein secretion IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA
 molecular_functionGO:0019905 syntaxin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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