ENSDARG00000029234


Danio rerio

Features
Gene ID: ENSDARG00000029234
  
Biological name :stxbp5b
  
Synonyms : stxbp5b / syntaxin binding protein 5b (tomosyn)
  
Possible biological names infered from orthology : Q5T5C0 / Q8K400 / STXBP5 / syntaxin binding protein 5
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 7229384
Gene end: 7351488
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000089501
NCBI entrez gene - 571925     See in Manteia.
swissprot - E7F0C0
ZFIN ID - ZDB-GENE-090821-5
Ensembl - ENSDARG00000029234
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STXBP5ENSGALG00000012336Gallus gallus
 Q5T5C0ENSG00000164506Homo sapiens
 Q8K400ENSMUSG00000019790Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stxbp5a / syntaxin binding protein 5a (tomosyn) / STXBP5* / Q5T5C0* / Q8K400* / syntaxin binding protein 5*ENSDARG0000000265681
Q5SQE2 / stxbp5l / syntaxin binding protein 5-like / Q5DQR4* / Q9Y2K9*ENSDARG0000000638363
llgl2 / Q7SZE3 / lethal giant larvae homolog 2 (Drosophila) / Q3TJ91* / Q6P1M3* / Lethal(2) giant larvae protein homolog 2 * / LLGL2, scribble cell polarity complex component*ENSDARG0000002392025
llgl1 / lethal giant larvae homolog 1 (Drosophila) / Q15334* / Q80Y17* / Lethal(2) giant larvae protein homolog 1 * / LLGL1, scribble cell polarity complex component*ENSDARG000000096939


Protein motifs (from Interpro)
Interpro ID Name
 IPR000664  Lethal(2) giant larvae protein
 IPR001388  Synaptobrevin
 IPR001680  WD40 repeat
 IPR013577  Lethal giant larvae homologue 2
 IPR013905  Lethal giant larvae (Lgl)-like, C-terminal domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0017157 regulation of exocytosis IBA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0050708 regulation of protein secretion IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA
 molecular_functionGO:0019905 syntaxin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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