ENSDARG00000006206


Danio rerio

Features
Gene ID: ENSDARG00000006206
  
Biological name :pou4f3
  
Synonyms : pou4f3 / POU class 4 homeobox 3 / Q90435
  
Possible biological names infered from orthology : POU domain, class 4, transcription factor 3 / Q15319 / Q63955
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 54290896
Gene end: 54292162
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124728
NCBI entrez gene - 30534     See in Manteia.
RefSeq - NM_131278
RefSeq Peptide - NP_571353
swissprot - Q90435
ZFIN ID - ZDB-GENE-990415-24
Ensembl - ENSDARG00000006206
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POU4F3ENSGALG00000043334Gallus gallus
 POU4F3ENSG00000091010Homo sapiens
 Pou4f3ENSMUSG00000024497Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pou4f2 / POU class 4 homeobox 2 / Q12837* / Q63934* / POU domain, class 4, transcription factor 2 *ENSDARG0000006973775
pou4f1 / POU class 4 homeobox 1 / Q01851*ENSDARG0000000555972
zgc:158291ENSDARG0000004437572
P79745 / pou3f3b / POU class 3 homeobox 3bENSDARG0000009589631
P56224 / pou3f3a / POU class 3 homeobox 3aENSDARG0000004203231
P79746 / pou3f2b / POU class 3 homeobox 2b / POU3F2* / P20265* / P31360* / POU class 3 homeobox 2* / POU domain, class 3, transcription factor 2*ENSDARG0000007626229
pou2f2a / POU class 2 homeobox 2a / Q00196* / P09086* / POU2F2* / POU class 2 homeobox 2* / POU domain, class 2, transcription factor 2 *ENSDARG0000001965829
pou1f1 / POU class 1 homeobox 1 / P28069* / Q00286* / POU domain, class 1, transcription factor 1*ENSDARG0000005892427
pou2f2a / POU class 2 homeobox 2a / Q00196* / P09086* / POU2F2* / POU class 2 homeobox 2* / POU domain, class 2, transcription factor 2 *ENSDARG0000003681627
pou2f3 / POU class 2 homeobox 3 / Q9UKI9*ENSDARG0000005238727
Q90482 / pou3f1 / POU class 3 homeobox 1 / Q03052* / P21952* / POU domain, class 3, transcription factor 1 *ENSDARG0000000982326
pou3f2a / POU class 3 homeobox 2aENSDARG0000007022026
pou2f1b / POU class 2 homeobox 1b / P25425* / POU2F1* / P14859* / POU class 2 homeobox 1* / POU domain, class 2, transcription factor 1 *ENSDARG0000000799625
pou5f3 / POU domain, class 5, transcription factor 3 / POU5F2* / Q8N7G0* / P20263* / POU5F1* / Q01860* / Q06416* / POU5F1B* / POU class 5 homeobox 1* / POU class 5 homeobox 1B* / POU domain...ENSDARG0000004477424


Protein motifs (from Interpro)
Interpro ID Name
 IPR000327  POU-specific domain
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR013847  POU domain
 IPR017970  Homeobox, conserved site
 IPR032961  POU domain, class 4, transcription factor 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007420 brain development IEP
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0048839 inner ear development IEA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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