ENSDARG00000019658


Danio rerio

Features
Gene ID: ENSDARG00000019658
  
Biological name :pou2f2a
  
Synonyms : pou2f2a / POU class 2 homeobox 2a
  
Possible biological names infered from orthology : P09086 / POU2F2 / POU class 2 homeobox 2 / POU domain, class 2, transcription factor 2 / Q00196
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 10918252
Gene end: 10991240
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000115767
Ensembl peptide - ENSDARP00000049322
Ensembl peptide - ENSDARP00000142486
swissprot - A0A140LGV7
swissprot - E7F4K0
swissprot - F1Q6P5
ZFIN ID - ZDB-GENE-060310-2
Ensembl - ENSDARG00000019658
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P09086ENSG00000028277Homo sapiens
 Pou2f2ENSMUSG00000008496Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pou2f2a / POU class 2 homeobox 2a / Q00196* / P09086* / POU2F2* / POU class 2 homeobox 2* / POU domain, class 2, transcription factor 2 *ENSDARG0000003681662
pou2f1b / POU class 2 homeobox 1b / P25425* / POU2F1* / P14859* / POU class 2 homeobox 1* / POU domain, class 2, transcription factor 1 *ENSDARG0000000799639
pou2f3 / POU class 2 homeobox 3 / Q9UKI9*ENSDARG0000005238727
P56224 / pou3f3a / POU class 3 homeobox 3aENSDARG0000004203221
P79745 / pou3f3b / POU class 3 homeobox 3bENSDARG0000009589620
pou3f2a / POU class 3 homeobox 2aENSDARG0000007022019
P79746 / pou3f2b / POU class 3 homeobox 2b / POU3F2* / P20265* / P31360* / POU class 3 homeobox 2* / POU domain, class 3, transcription factor 2*ENSDARG0000007626219
pou5f3 / POU domain, class 5, transcription factor 3 / POU5F2* / Q8N7G0* / P20263* / POU5F1* / Q01860* / Q06416* / POU5F1B* / POU class 5 homeobox 1* / POU class 5 homeobox 1B* / POU domain...ENSDARG0000004477417
Q90482 / pou3f1 / POU class 3 homeobox 1 / Q03052* / P21952* / POU domain, class 3, transcription factor 1 *ENSDARG0000000982317
pou4f1 / POU class 4 homeobox 1 / Q01851*ENSDARG0000000555914
pou1f1 / POU class 1 homeobox 1 / P28069* / Q00286* / POU domain, class 1, transcription factor 1*ENSDARG0000005892414
pou4f2 / POU class 4 homeobox 2 / Q12837* / Q63934* / POU domain, class 4, transcription factor 2 *ENSDARG0000006973714
zgc:158291ENSDARG0000004437514
pou4f3 / Q90435 / POU class 4 homeobox 3 / Q15319*ENSDARG0000000620614


Protein motifs (from Interpro)
Interpro ID Name
 IPR000327  POU-specific domain
 IPR000972  Octamer-binding transcription factor
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR013847  POU domain
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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