ENSDARG00000052387


Danio rerio

Features
Gene ID: ENSDARG00000052387
  
Biological name :pou2f3
  
Synonyms : pou2f3 / POU class 2 homeobox 3
  
Possible biological names infered from orthology : POU domain, class 2, transcription factor 3 / Q9UKI9
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 58550291
Gene end: 58602307
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000147783
Ensembl peptide - ENSDARP00000044802
Ensembl peptide - ENSDARP00000146427
NCBI entrez gene - 553427     See in Manteia.
RefSeq - NM_001045255
RefSeq - NM_001199683
RefSeq - XM_005171993
RefSeq - XM_005171994
RefSeq Peptide - NP_001038720
RefSeq Peptide - NP_001186612
swissprot - F6NVR7
swissprot - A1L1Z1
ZFIN ID - ZDB-GENE-060512-299
Ensembl - ENSDARG00000052387
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POU2F3ENSGALG00000006673Gallus gallus
 POU2F3ENSG00000137709Homo sapiens
 Pou2f3ENSMUSG00000032015Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pou2f2a / POU class 2 homeobox 2a / Q00196* / P09086* / POU2F2* / POU class 2 homeobox 2* / POU domain, class 2, transcription factor 2 *ENSDARG0000001965847
pou2f1b / POU class 2 homeobox 1b / P25425* / POU2F1* / P14859* / POU class 2 homeobox 1* / POU domain, class 2, transcription factor 1 *ENSDARG0000000799645
pou2f2a / POU class 2 homeobox 2a / Q00196* / P09086* / POU2F2* / POU class 2 homeobox 2* / POU domain, class 2, transcription factor 2 *ENSDARG0000003681644
P56224 / pou3f3a / POU class 3 homeobox 3aENSDARG0000004203231
P79746 / pou3f2b / POU class 3 homeobox 2b / POU3F2* / P20265* / P31360* / POU class 3 homeobox 2* / POU domain, class 3, transcription factor 2*ENSDARG0000007626230
P79745 / pou3f3b / POU class 3 homeobox 3bENSDARG0000009589630
Q90482 / pou3f1 / POU class 3 homeobox 1 / Q03052* / P21952* / POU domain, class 3, transcription factor 1 *ENSDARG0000000982330
pou5f3 / POU domain, class 5, transcription factor 3 / POU5F2* / Q8N7G0* / P20263* / POU5F1* / Q01860* / Q06416* / POU5F1B* / POU class 5 homeobox 1* / POU class 5 homeobox 1B* / POU domain...ENSDARG0000004477428
pou3f2a / POU class 3 homeobox 2aENSDARG0000007022028
zgc:158291ENSDARG0000004437524
pou1f1 / POU class 1 homeobox 1 / P28069* / Q00286* / POU domain, class 1, transcription factor 1*ENSDARG0000005892424
pou4f2 / POU class 4 homeobox 2 / Q12837* / Q63934* / POU domain, class 4, transcription factor 2 *ENSDARG0000006973723
pou4f3 / Q90435 / POU class 4 homeobox 3 / Q15319*ENSDARG0000000620623
pou4f1 / POU class 4 homeobox 1 / Q01851*ENSDARG0000000555923


Protein motifs (from Interpro)
Interpro ID Name
 IPR000327  POU-specific domain
 IPR000972  Octamer-binding transcription factor
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR013847  POU domain
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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