ENSDARG00000016789


Danio rerio

Features
Gene ID: ENSDARG00000016789
  
Biological name :zgc:152891
  
Synonyms : zgc:152891
  
Possible biological names infered from orthology : ALOX12B / ALOX15B / Alox8 / ALOXE3 / arachidonate 12-lipoxygenase, 12R type / arachidonate 15-lipoxygenase, type B / Arachidonate 8S-lipoxygenase / arachidonate lipoxygenase 3 / O15296 / O35936 / O70582 / O75342 / Q9BYJ1 / Q9WV07
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 31194980
Gene end: 31226045
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000023401
Ensembl peptide - ENSDARP00000144643
Ensembl peptide - ENSDARP00000146594
NCBI entrez gene - 767741     See in Manteia.
RefSeq - NM_001076710
RefSeq Peptide - NP_001070178
swissprot - F1QKM3
swissprot - Q08BZ2
ZFIN ID - ZDB-GENE-061013-229
Ensembl - ENSDARG00000016789
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ALOXE3ENSG00000179148Homo sapiens
 O15296ENSG00000179593Homo sapiens
 O75342ENSG00000179477Homo sapiens
 Alox8ENSMUSG00000020891Mus musculus
 Aloxe3ENSMUSG00000020892Mus musculus
 O70582ENSMUSG00000032807Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-17e16.9 / ALOX12* / P18054* / P39654* / P39655* / P55249* / ALOX15* / P16050* / Alox12e* / arachidonate 12-lipoxygenase* / arachidonate 15-lipoxygenase* / arachidonate lipoxygenase,...ENSDARG0000007378138
alox12 / arachidonate 12-lipoxygenaseENSDARG0000006946337
alox5a / arachidonate 5-lipoxygenase a / ALOX5* / P09917* / P48999* / arachidonate 5-lipoxygenase*ENSDARG0000005727336
alox5b.3 / arachidonate 5-lipoxygenase b, tandem duplicate 3 / ALOX5* / P09917* / P48999* / arachidonate 5-lipoxygenase*ENSDARG0000006996635
alox5b.2 / arachidonate 5-lipoxygenase b, tandem duplicate 2 / ALOX5* / P09917* / P48999* / arachidonate 5-lipoxygenase*ENSDARG0000004308935
alox5b.1 / arachidonate 5-lipoxygenase b, tandem duplicate 1 / ALOX5* / P09917* / P48999* / arachidonate 5-lipoxygenase*ENSDARG0000004308533


Protein motifs (from Interpro)
Interpro ID Name
 IPR000907  Lipoxygenase
 IPR001024  PLAT/LH2 domain
 IPR001885  Lipoxygenase, mammalian
 IPR013819  Lipoxygenase, C-terminal
 IPR020834  Lipoxygenase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of 12-eicosatetraenoic acid derivatives
Synthesis of 15-eicosatetraenoic acid derivatives


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr