Manteia

ENSDARG00000018896

Danio rerio

Features

Gene ID:	ENSDARG00000018896

Biological name :	mmp24

Synonyms :	matrix metallopeptidase 24 / mmp24

Possible biological names infered from orthology :	Matrix metalloproteinase-24 Processed matrix metalloproteinase-24 / Q9R0S2 / Q9Y5R2

Species:	Danio rerio

Chr. number:	6
Strand:	-1
Band:
Gene start:	52362395
Gene end:	52428826

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000047398 Ensembl peptide - ENSDARP00000147423 NCBI entrez gene - 571143 See in Manteia. swissprot - E9QIX9 ZFIN ID - ZDB-GENE-040724-262 Ensembl - ENSDARG00000018896

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
MMP24	ENSGALG00000041093	Gallus gallus
MMP24	ENSG00000125966	Homo sapiens
Mmp24	ENSMUSG00000027612	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
mmp16b / matrix metallopeptidase 16b (membrane-inserted) / MMP16* / P51512* / Q9WTR0* / matrix metallopeptidase 16* / Matrix metalloproteinase-16 *	ENSDARG00000058876	59
mmp15b / matrix metallopeptidase 15b / MMP15* / P51511* / matrix metallopeptidase 15*	ENSDARG00000013072	53
mmp14b / matrix metallopeptidase 14b (membrane-inserted) / MMP14* / P50281* / P53690* / matrix metallopeptidase 14* / Matrix metalloproteinase-14 *	ENSDARG00000008388	50
mmp14a / matrix metallopeptidase 14a (membrane-inserted) / MMP14* / P50281* / P53690* / matrix metallopeptidase 14* / Matrix metalloproteinase-14 *	ENSDARG00000002235	49
mmp15a / matrix metallopeptidase 15a / MMP15* / O54732* / P51511* / matrix metallopeptidase 15* / Matrix metalloproteinase-15 *	ENSDARG00000051962	48
mmp25b / matrix metallopeptidase 25b / MMP25* / Q9NPA2* / matrix metallopeptidase 25*	ENSDARG00000010556	32
mmp25a / matrix metallopeptidase 25a / MMP25* / Q3U435* / Q9NPA2* / matrix metallopeptidase 25* / Matrix metalloproteinase-25 *	ENSDARG00000077290	31
mmp17a / matrix metallopeptidase 17a / MMP17* / Q9R0S3* / Q9ULZ9* / matrix metallopeptidase 17* / Matrix metalloproteinase-17 *	ENSDARG00000078915	29
mmp11a / matrix metallopeptidase 11a / MMP11* / P24347* / Q02853* / Stromelysin-3 * / matrix metallopeptidase 11*	ENSDARG00000026325	28
mmp11b / matrix metallopeptidase 11b / MMP11* / P24347* / Q02853* / Stromelysin-3 * / matrix metallopeptidase 11*	ENSDARG00000016718	27
mmp13b / matrix metallopeptidase 13b / MMP13* / P45452* / P33435* / Collagenase 3 * / matrix metallopeptidase 13*	ENSDARG00000100794	27
mmp30 / matrix metallopeptidase 30 / MMP7* / P09237* / matrix metallopeptidase 7*	ENSDARG00000045887	27
mmp13a / matrix metallopeptidase 13a	ENSDARG00000012395	27
mmp13a / matrix metallopeptidase 13a	ENSDARG00000114451	27
LO018336.1	ENSDARG00000108401	25
mmp20a / matrix metallopeptidase 20a (enamelysin) / MMP20* / O60882* / P57748* / matrix metallopeptidase 20* / Matrix metalloproteinase-20 *	ENSDARG00000089887	25
mmp17b / matrix metallopeptidase 17b	ENSDARG00000102956	25
mmp20b / matrix metallopeptidase 20b (enamelysin)	ENSDARG00000055479	24

Protein motifs (from Interpro)

Interpro ID	Name
IPR000585	Hemopexin-like domain
IPR001818	Peptidase M10, metallopeptidase
IPR002477	Peptidoglycan binding-like
IPR006026	Peptidase, metallopeptidase
IPR018486	Hemopexin, conserved site
IPR018487	Hemopexin-like repeats
IPR021190	Peptidase M10A
IPR021805	Peptidase M10A, matrix metallopeptidase, C-terminal
IPR024079	Metallopeptidase, catalytic domain superfamily
IPR028723	Matrix metalloproteinase-24
IPR033739	Peptidase M10A, catalytic domain

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006508	proteolysis	IEA
cellular_component	GO:0005887	integral component of plasma membrane	IEA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA
cellular_component	GO:0031012	extracellular matrix	IEA
molecular_function	GO:0004222	metalloendopeptidase activity	IEA
molecular_function	GO:0008233	peptidase activity	IEA
molecular_function	GO:0008237	metallopeptidase activity	IEA
molecular_function	GO:0008270	zinc ion binding	IEA
molecular_function	GO:0016787	hydrolase activity	IEA
molecular_function	GO:0046872	metal ion binding	IEA

Pathways (from Reactome)

Pathway description

Activation of Matrix Metalloproteinases

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

External programs and data are copyrighted by and are the property of their respective authors. The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation
		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr